G15929


Basic Information

Item Value
gene id G15929
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1240346 ~ 1241047 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23674
GGACGATGATCCGGTGATCTGGGGAGGGGCGAGGAGGTTCCTGAGGCCCTGCCCTCTTTCTGGGAGCAGGTTTGGGAGGTTCTTGTATGTCAGTCTCTGATGAGATGGAAAGATGTCCTTCATTAAGTTTGTCTCCGTGACGTCTCACTCCTGTCTCTGTACAGCTCACTCTTTTCTCTATATGTCTCACTCTTTCCCCCGCAAGTCTCACTATTGTTTCTGTCCATCTCACTCCCGTCTCGGTCCGTCTCTCACTCCTGTCTCCATCTGTCTCGCTCTTATCTCTGTCCATCTCACTCCTGTCTCCGTGCATCTCTCTCCTGTCTCCGTCAGTCTTGTTCCTGTCTCCGTCAGTCTTGCTCCTGTCTCTGTACGTCTCACTCCTGTCTCCGTCCGTCTCACTGGTGTTGCTCTGTGAGTGTTGATTTGTGGGCTGGTTGTGTTCAGAAGCTGGTCTGCAGGGATAACTGCACTGCAGTAAACCCACCTCACTGTCCACTGTGAAAGAGATCGGCAGCAGAGAGCGACGACA

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23674 True 532 lncRNA 0.53 2 1240346 1241047

Neighbor

gene id symbol gene type direction distance location
LOC122329817 LOC100537134 coding upstream 5442 1230001 ~ 1234904 (+)
sox10 sox10,LOC107674484,LOC107711804,LOC107563722,LOC107727045,LOC107679477 coding upstream 15429 1217521 ~ 1224917 (+)
kcnj4 kcnj4,LOC107711802,LOC107679476,LOC107727044 coding upstream 42308 1188018 ~ 1198038 (+)
LOC122330304 LOC107561208,LOC107727047,LOC107679470 coding upstream 61005 1176232 ~ 1179341 (+)
LOC122329844 LOC107563756,LOC107731666 coding upstream 64275 1160237 ~ 1176071 (+)
LOC122332730 NA coding downstream 131485 1372532 ~ 1374290 (+)
LOC122329966 NA coding downstream 135402 1376449 ~ 1380026 (+)
LOC122330340 NA coding downstream 146437 1387484 ~ 1389699 (+)
LOC122330593 polr2f,LOC107727050 coding downstream 174570 1415617 ~ 1418312 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding downstream 209191 1450238 ~ 1453084 (+)
G15927 NA non-coding upstream 24741 1215316 ~ 1215605 (+)
G15925 NA non-coding upstream 26718 1213325 ~ 1213628 (+)
G15911 NA non-coding upstream 87118 1152825 ~ 1153228 (+)
G15886 NA non-coding upstream 106554 1120640 ~ 1133792 (+)
LOC122330723 NA non-coding downstream 38216 1279263 ~ 1281171 (+)
LOC122330682 NA non-coding downstream 142201 1383248 ~ 1384894 (+)
G15967 NA non-coding downstream 173168 1414215 ~ 1415199 (+)
G15972 NA non-coding downstream 200212 1441259 ~ 1441742 (+)
G15944 NA non-coding downstream 244524 1485571 ~ 1490779 (+)
LOC122330066 NA other upstream 189195 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 230915 1005983 ~ 1009431 (+)
LOC122330463 NA other upstream 464812 754430 ~ 775534 (+)
LOC122330407 NA other upstream 604107 625364 ~ 636239 (+)
G15563 NA other upstream 683265 553698 ~ 557081 (+)
G15939 NA other downstream 49922 1290969 ~ 1291564 (+)
G15955 NA other downstream 149692 1390739 ~ 1392850 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other downstream 154800 1395847 ~ 1408926 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 318340 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 378265 1619312 ~ 1865229 (+)

Expression


Co-expression Network