G15944


Basic Information

Item Value
gene id G15944
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1485571 ~ 1490779 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23696
ATTTTGGTATATTTACCACAGGAAATGATCTTCATGGAACCTGATCTGCTCTTAACATCCTAATGATGTTTGGCATAAAAGGTCGCTTTAGAAACAATCCTCCTGTAATGAGCATATCCTCAGACACACGTACGATCTTCTCCATCGGAGAGCGATGAAGACTCACCCTGCCAGAAGGAGAGGAAGATGACGGATTTGACCATGAGGAACTTCAGCATGGGGCCGTACGGCTCCAGAAGATCCCGGGTGGCGAAGtagaagaggaagagagcgtagagagagagactgaccGAGACGTTATAGATGATGGTCACGTATAAATAACCACTGGCCGCActgaaacagagacagagacgagGTTCACtaccggtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtctctctgtctgtgtgtgtgtgtctctgtctctgtgtgagtgtctctgtctgtgtgtgtgagtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgagatgcacAGACACACTTGAAGTCTCCGTCTCTGTATTTCCCGAAGGCCTGTAGGATGACGGTGATCACGGCCATCAGAGGTTTCACCACACAGAACTGCAGCGTCGCCTGTTGGCAGGTGAGCAGCAGAGCCGTCCAGGTGAAGATCCCGGAGATGGTTTGAGCGGCGGGGGTCATGAGGAAGATGGGCGTCTCGGGGGCCACCGCCGGCGTCTCCCACGACCCGTTGTGACCCCCAGGGGCCACCGTAACGACCCCGGGCCCTGGCGCCATGCCAACCAGAGAGCCGTTCCCCGAGCGCTCGGATACGGACACGCCCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23696 True 1033 lncRNA 0.54 2 1485571 1490779

Neighbor

gene id symbol gene type direction distance location
LOC122329871 NA coding upstream 22318 1456950 ~ 1463253 (+)
LOC122330185 micall1,LOC107727039,LOC107674481,LOC107711806,LOC107563760 coding upstream 32487 1450238 ~ 1453084 (+)
LOC122330593 polr2f,LOC107727050 coding upstream 67259 1415617 ~ 1418312 (+)
LOC122330340 NA coding upstream 95872 1387484 ~ 1389699 (+)
LOC122329966 NA coding upstream 105545 1376449 ~ 1380026 (+)
LOC122329679 NA coding downstream 17714 1508493 ~ 1516411 (+)
LOC122329687 NA coding downstream 26729 1517508 ~ 1525476 (+)
cdc42ep1b LOC107579628,LOC107711548,LOC107711549 coding downstream 67572 1558351 ~ 1565942 (+)
LOC122329645 NA coding downstream 76566 1567345 ~ 1579821 (+)
LOC122329650 NA coding downstream 99899 1590678 ~ 1601654 (+)
G15972 NA non-coding upstream 43829 1441259 ~ 1441742 (+)
G15967 NA non-coding upstream 70372 1414215 ~ 1415199 (+)
LOC122330682 NA non-coding upstream 100677 1383248 ~ 1384894 (+)
LOC122330723 NA non-coding upstream 204400 1279263 ~ 1281171 (+)
G15929 NA non-coding upstream 244524 1240346 ~ 1241047 (+)
G16004 NA non-coding downstream 124381 1615160 ~ 1615529 (+)
G16008 NA non-coding downstream 198263 1689042 ~ 1704676 (+)
G16027 LOC107691092,LOC107572810,LOC107722836 non-coding downstream 279978 1770757 ~ 1979709 (+)
G16028 NA non-coding downstream 286207 1776986 ~ 1989269 (+)
LOC122330751 NA non-coding downstream 334011 1824790 ~ 1826317 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other upstream 76645 1395847 ~ 1408926 (+)
G15955 NA other upstream 92721 1390739 ~ 1392850 (+)
G15939 NA other upstream 194007 1290969 ~ 1291564 (+)
LOC122330066 NA other upstream 434420 1047012 ~ 1051151 (+)
LOC122330135 NA other upstream 476140 1005983 ~ 1009431 (+)
G16003 pick1,LOC107734822,LOC106607154 other downstream 68608 1559387 ~ 1649494 (+)
G16002 pick1,LOC107734822,LOC107734770 other downstream 128533 1619312 ~ 1865229 (+)
trnar-ccu plbd1,LOC107563730 other downstream 130144 1620923 ~ 1623394 (+)
trnar-ccu_1 NA other downstream 159877 1650656 ~ 1650728 (+)
trnar-ccu_2 NA other downstream 374934 1865713 ~ 1865785 (+)

Expression


Co-expression Network