G16028


Basic Information

Item Value
gene id G16028
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1776986 ~ 1989269 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23819
CCACAAGATGTCACTAGCGTGAACCCTCTCCAAAGGCTTTGAGGGGAAAGTCTAGAAACTACCATGAATATAATGCATGCAAATCATTAACCATGTAAGgacagacgagcagacccaattgcagaaaaaaaacagtttatttaacaatCAAGGGTTTTGTTGTAATAGTCCAAAAGACGGGTGAAACCGCTGGCAGTGACTCCAGCCCCAATTCCAGAGGCAATTCAAATGGACGCATTCAGGTGGGACGAAGGGTGAACCAGACCCTACCGGTGGGGCGGGAAAAGGTGTGACCGGGATGCCTCACACAGTAGCCATGTCCAGcatcaacaaaacaacaaaacacaagaccaaCACAACAGGCCGCTGCCAACCCCTGACAAACCAGGTGAGATTGCTTAATGCATTTCTAGCTACAAGAACATGACTTTCGAGTATGGACTGggaaattacaatatattaaaacgtAATTGCAATGATTGTTATAAAGGGTAACTTTTCAAAAGTTGTAATAACACAATGTTcattttaagatattaagatattataaCACTCTGCAACACtgactttttgtgcacaaaacaaACTTGAAAATGGAAGAAACACAAtgccatttttaataaagacCCATTCCCGCTGCCTCATATCAATTAAAGGTGGACCATGAAAGAGGGTTGAGAAAAAGGTTATAGCTCTAGTTgcgtaaaaatacaaatagaaacaTAATTACACAAAAGTAATGTTTACTGCATTATACTGTGATCGatgtgtaattttaattttcttttataacATGAATTATAAGTCTTGGACAAATACTGCAGAGATCACATCAACAGCCCAAAGACAGTATGCTCTGATTGCCGTCTAACAGATGAAAGCTTTATTAAGTGTATAAACAGGATTTATTCTCTATTTAAGCAACATGAAGTAAAATATCCGTTCATCAAACATGACAGAATCGTGTTCTGGTTGAcgcagttttttctttaatcctGAAATATGAAGGTCAAGATGCCGAAGTCGTTGTCAGTTGGGGAGAGCAGGTTTTCGGCTCTGGCTCTGTGTAACGTCCTGCGCAGGAAATCCCTTCGTTCGCGCCACTCCTGAAGCTCCTCCTCGCTGTGAGCGAAGTCACAACTCGCACCATCGGCACAGCCCTCCTCcgacctgtcaatcaaacacacaGCCAATCAGGACAAAGACAACCCCTTCGCGACCGATGACGCTCACTGATTTGACGATGGTGAACCTGGGACAGATGGAGAAGCGGGGTCCGGGGAAGCGGTGGGACCAGATGGAGAAGCGGGGTCCGGGGAAGCGGTGGGACCAGGCCAGGCTCTCGTCCTCTCCCTCTCCGCTGAACACTCTCTGCTTGTGCTTCTCTGTGGAGATGTGCTGCTGCCACTGACGATTACTGCTGCTGTGTTTCCCACACAGAGAACAGTAGAACCCGTTCAGCTGTAGAAATAAAACACGACCCACGTTTCCATTCGTCACCTCCGTTCTGATTGGACTCTTCGATTTGGCACCAGTGATTTTGCTCAGTGAGAGTGAAGCTACGACCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23819 True 1571 lncRNA 0.59 3 1776986 1989269

Neighbor

gene id symbol gene type direction distance location
LOC122332958 NA coding upstream 46989 1728370 ~ 1729997 (+)
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 49293 1711295 ~ 1727693 (+)
LOC122330144 tob2,LOC107572283,LOC107691089,LOC107745517,LOC107734722,LOC107672913,LOC107563731 coding upstream 76323 1693056 ~ 1700663 (+)
LOC122330255 pmm1,LOC107672914,LOC107691086,LOC100007686 coding upstream 90009 1680314 ~ 1686977 (+)
LOC122330554 NA coding upstream 113388 1660521 ~ 1663598 (+)
rangap1a rangap1,rangap1a,LOC107745514,LOC107722837 coding downstream 13410 2002679 ~ 2010431 (+)
si:ch211-106h11.3 LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113 coding downstream 141949 2131218 ~ 2140821 (+)
LOC122341668 LOC107755616,LOC107672923 coding downstream 272341 2261610 ~ 2267508 (+)
LOC122341669 LOC107745245,LOC107575245,LOC107755608,LOC107672924 coding downstream 278319 2267588 ~ 2270464 (+)
LOC122333376 NA coding downstream 304034 2293303 ~ 2296045 (+)
G16008 NA non-coding upstream 72310 1689042 ~ 1704676 (+)
G16004 NA non-coding upstream 161457 1615160 ~ 1615529 (+)
G15944 NA non-coding upstream 286207 1485571 ~ 1490779 (+)
G15972 NA non-coding upstream 335244 1441259 ~ 1441742 (+)
G15967 NA non-coding upstream 361787 1414215 ~ 1415199 (+)
G16233 NA non-coding downstream 39125 2028394 ~ 2030843 (+)
G16243 LOC107755616,LOC107672923 non-coding downstream 54382 2043651 ~ 2046384 (+)
G16226 NA non-coding downstream 60916 2050185 ~ 2056000 (+)
G16219 myh9,LOC107745511,LOC107672897,LOC107691111 non-coding downstream 74296 2063565 ~ 2069715 (+)
G16238 myh9b,myh9,LOC106957010,LOC107751969 non-coding downstream 85891 2075160 ~ 2078850 (+)
trnar-ccu_1 NA other upstream 126258 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 127492 1559387 ~ 1649494 (+)
trnar-ccu plbd1,LOC107563730 other upstream 153592 1620923 ~ 1623394 (+)
LOC122330032 LOC107674481,LOC107727039,LOC107711806,LOC107563760 other upstream 368060 1395847 ~ 1408926 (+)
G15955 NA other upstream 384136 1390739 ~ 1392850 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other downstream 35079 2024348 ~ 2320138 (+)
G16223 txn2,LOC107745512 other downstream 122768 2112037 ~ 2114339 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 171077 2160346 ~ 2165693 (+)
G16347 NA other downstream 578815 2568084 ~ 2568999 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 651877 2641146 ~ 2646756 (+)

Expression


Co-expression Network