G16233


Basic Information

Item Value
gene id G16233
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2028394 ~ 2030843 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24151
ACGCGACCCGGGAGAAGCGCGCTTTGCTGATGGCGGGAACAGAAACAACGACAAGATGATCCTTGATTGAGAGTGCCGTGAAAACTGTTTTGTGGATGTTAATGGTATGCGAGACCCTCCCGGATTGGATAACACAGTTTCACCCTTGAGTTGCTATCTAGTCCAAACACAGCATACAGCGGCTGAGTGAATATGGTCTGGACTCTGTGGATGAGACTCATTGTGTCtgagacgctgtagaaggacagagtccCTGCGCTGtgatccacatacactcctactctacTGGAGATATTGAGTACTGGAAGAACGTATTCTGTGTTCTTGTGCCAGAACGAGCAACAGAAAGGAGTGCAGTACAatctccaggactgatcattacaCCCAGCTACACTCTCAGGGATGTTCCCCTTCCTGCTGATGCTCTCGTATGTTACTCCTATATCCACTCCCGATGGCTCTTTGCTGCTCCACTCCACTTCCCAATAACAGCATCCAGTCATACTCTCTCGACACAATGCTTGCCACCAGtgatcaaatctgtctggatggtCAGGATAATGTTGTTTGGTGTCGGAGACCGTAATTACTCGGTTTCCCTCAGACAGACGGAGGAAATAATTCACTGAGTTCGGATCCAAAGTCAGCTGACAGGAATCTATTGGACATAAACACGCAAAATCATTCATCAACATTCGTATATGAATGTACTCTTTAGatgaattttatgtttattgataACACTGCGGCCTCGTTTCTAAAGCGTTAAGCAGAAACCATCCTAAAATTGTTCCCACAATCATCTGTAAAATACGAGTATGTgtgattcataaaatgaatGTACATAAAGAAAACGCACATACATGTCACTTTCAGGAAATTTTGCATTGGTATCTTTTATGAGCGTAGTGTTGTGTTTCTGGCTAAACCTTTTACAGttacttataataaaatattcctTGTGTTACAGGGGTCAAATATGGTTTATATAAAGCctaaattgctttttttcacaaacaaaaGGCATTTCAGCCTGTCACAACCAATGGGGCCATCTGTCTGTATAAGTTGGTACTGAAtgccatttctttaaaatatttcacttgtTAAGTAGCAGCATTGATTTAG

Function

GO:

id name namespace
GO:0044260 cellular macromolecule metabolic process biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0044424 obsolete intracellular part cellular_component
GO:0005874 microtubule cellular_component
GO:0099513 polymeric cytoskeletal fiber cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0043226 organelle cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU24151 True 1128 lncRNA 0.42 2 2028394 2030843

Neighbor

gene id symbol gene type direction distance location
rangap1a rangap1,rangap1a,LOC107745514,LOC107722837 coding upstream 17963 2002679 ~ 2010431 (+)
LOC122333258 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 86601 1925747 ~ 1941793 (+)
LOC122330213 plbd1,LOC107563730,LOC107572281,LOC107672894 coding upstream 157784 1867624 ~ 1870610 (+)
LOC122332958 NA coding upstream 298397 1728370 ~ 1729997 (+)
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 300701 1711295 ~ 1727693 (+)
si:ch211-106h11.3 LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113 coding downstream 100375 2131218 ~ 2140821 (+)
LOC122341668 LOC107755616,LOC107672923 coding downstream 230767 2261610 ~ 2267508 (+)
LOC122341669 LOC107745245,LOC107575245,LOC107755608,LOC107672924 coding downstream 236745 2267588 ~ 2270464 (+)
LOC122333376 NA coding downstream 262460 2293303 ~ 2296045 (+)
LOC122341568 LOC107672927,LOC107755614,LOC107742419,LOC107712223 coding downstream 292857 2323700 ~ 2340093 (+)
G16028 NA non-coding upstream 39125 1776986 ~ 1989269 (+)
G16027 LOC107691092,LOC107572810,LOC107722836 non-coding upstream 48685 1770757 ~ 1979709 (+)
LOC122330717 NA non-coding upstream 84665 1942689 ~ 1943729 (+)
G16017 NA non-coding upstream 137367 1871280 ~ 1891027 (+)
G16033 NA non-coding upstream 172710 1854895 ~ 1855684 (+)
G16243 LOC107755616,LOC107672923 non-coding downstream 12808 2043651 ~ 2046384 (+)
G16226 NA non-coding downstream 19342 2050185 ~ 2056000 (+)
G16219 myh9,LOC107745511,LOC107672897,LOC107691111 non-coding downstream 32722 2063565 ~ 2069715 (+)
G16238 myh9b,myh9,LOC106957010,LOC107751969 non-coding downstream 44317 2075160 ~ 2078850 (+)
G16241 NA non-coding downstream 111384 2142227 ~ 2143806 (+)
trnar-ccu_2 NA other upstream 162609 1865713 ~ 1865785 (+)
G16002 pick1,LOC107734822,LOC107734770 other upstream 163165 1619312 ~ 1865229 (+)
trnar-ccu_1 NA other upstream 377666 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 378900 1559387 ~ 1649494 (+)
G16223 txn2,LOC107745512 other downstream 81194 2112037 ~ 2114339 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 129503 2160346 ~ 2165693 (+)
G16347 NA other downstream 537241 2568084 ~ 2568999 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 610303 2641146 ~ 2646756 (+)
G16530 LOC107601546 other downstream 1252147 3282990 ~ 3283656 (+)

Expression


Co-expression Network