G16238 (myh9b,myh9,LOC106957010,LOC107751969)


Basic Information

Item Value
gene id G16238
gene name myh9b,myh9,LOC106957010,LOC107751969
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2075160 ~ 2078850 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24156
CCTCTGTCTGAACTCCTGGAAGACGATGCGGTTGGGGAAGCCCTGTCTGCAGATACGGATTCCCTCCAGGACGCCGTTACACCGCAGCTGATCCAGAACCAGGTGAGGGTCCAACTTACCAGCCTGAGACACCTTTTTCTCGTGGTTGGGAATGATGCAGCGGACGAAGTTGGGGTTGGTGTTTCTGAGCGTGGCCATGAGTTTGGACAGCTGCTCTTTATAGAGCTGCCCGACCGTGCGAAACATCCCCTTGCGGGTCTTAAACGCCCCCGGCAGCTCCGACATGCCGGCCACCTTATCCAGACCAACGATACGGTCCActgagacacagacagacacagagagacagacagtcAGGGCGCTGAAAGAGCTCCGTCTCGGGCATGCAGTCTGGTCATGATGTGAAAACTACCCACGGTTCAGTGGGTCACACACACGTCAGCACTGGTGAcaaaccacagacacacacacacacacacacacacacgatgctGGTGAAGAGTGGGGGGGAACACACGGGAAAATGATCCAAATCAATGCAGTGCAGGTGACacgtacatgtgtgtgtgtgtgtgtgtgtcgtctcTATGTAGGTGCGTGTTCAAGGGTCCAAAATAAACACTCGCCTCGTTCATGAGGACACGAGTAGAACTGAATGACACAGATTTCAGAACAATATCACGAACAACTCATTCTGCCCGTGTTTCATGAATGAGGCTCAACCAGCACAAAGCAAGCGTGAACGTTCACTTCGCCGAGTCATTTGtttggtatttttaattttttaagcgATAAAaaccaatttaaataaattactggCTTAACTCAACagataatatgaattaaatattacgaaattaaaaaaaggtaacttaaaataacaaaatattaaacttaaatagcaatatttaataaaagcacgCCAATAAAGTAACAAAAGTACAATTACCAAAGCCAAAAAATCTAAGTTTTCATCCACAAATACATTGTAGAAACCGATTTATCTATAAACTTAGGCAGAAAATAAAAGttccttatatattatatttattttaaattacaaaatacatttaaaaaggtaataaataaacttataaaatatttttggaaagtGACTGGAAAGTgtacaccattttttttttttaatggagtaaaacattatatttcctAATTTGTTTATACAGCAGTAATTGTGAGGTTTGGCTAAAGTGAATTTCGGACCCtgtgattgtgtgtgagtgtgtgtgtgtgtaactgcaTACTGTGGTCATGTTTCACTGGTGAGAACAGAACCAAACCCATGCAGTTTATACCCATTTCTGCAGTACCACAGACCAACAGCAGGGGCGCCAAAGCACACTATATTAcacagagaggagagacagcAGAAATATCAGAGATATATCTCAACACCTCAGAGAAACACAGTCACGCAGGACAGCTGATGGAgatggaggaggaagagaacgTCAcgggagtgagagagagagagagagagaaaaaaaacaaagatgtcACCTGGCTCTAAATGAAGGAAAGGAAAACGCTCATAGAAATAAGCTCTCTGACAGTTCTGGACCTCTGAGAAAGACGGACAGACGGGAGACGGTGTGTAGAGAGGTCCAGGAGGACGTGAAACAAGGGGtggatgtatggatggatggagaaggGAAGAAACAGAGGACCAAACACCAGCAGAAGAGAACAAATCCAGTGAGTTTTCACCCATGTCGGCATGAAAAAGGTGCCCAGAGTGTAAATATATTAGTCATTGTTCTCCTTTGTTGAGTTTTAAAGCTTCACGCCCTTGTGTCCTATATATTTCTTCAGCTTTTAGTCTTCCTCCACAATCTATGCATTTAGGAGCTGATTCAATGTGATCTGTCGACTCACCGTCTTTCCACAGCTCTGAAACAAACTTGTCGGTGGATTGATTGAGCAAAGTGGCCACGTTATCGTTCAGCGGGTCCATGTTCTTCATCAGCCACTCATCCGCCTTGTAATCCACCTGAGAAACACAATCACAGACGTTTAAAGTTCACAAACGAGGCTGTGAAATCTCATGGGGGTTCAGCCGAGGAGCACGTCAGCACCTTTCCGGCGTAGTGCATGATGCAGAAATCCGCCTCGTCCTTCAGTTTCTTGGGTTTGTGGAATTTGGAATGCGTCCCCTGCTCCTGCAGGACCTTCTCCACAAAGCTCTTGTCCGTGGCTTTGGGGAACCAGCACTCTTCGTCCAGGAGAGCCAGGATTCCTGGAGGACTCGCCTGGAAACATGCATCACACATCACAATCAAAAGTCTTCATCATCAGCAGAAGATCACAACTGAGATTTCAAACTGGATTTAGTATTTTATACATCAGGATCAGAGTAATATCTAGACTATTTTTGACCATCTTGGCCCAggtaatgaatatttttaaccAGTTTGGCTGAGCTAATGAGCATTTTCAACAAGCTAAGATCAGCTGATAACCAGTTTAGACAAGCTAATGACTATTTTGACCCTATTTTTC

Function

symbol description
myh9b Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within actin filament bundle distribution; midbrain-hindbrain boundary morphogenesis; and regulation of cell shape. Predicted to be part of myosin complex. Is expressed in several structures, including brain; ectoderm; epidermis; eye; and pectoral fin. Human ortholog(s) of this gene implicated in several diseases, including auditory system disease (multiple); autosomal dominant Alport syndrome; blood platelet disease (multiple); end stage renal disease; and orofacial cleft. Orthologous to human MYH9 (myosin heavy chain 9).
myh9 Enables several functions, including adenyl ribonucleotide binding activity; integrin binding activity; and protein homodimerization activity. Contributes to actin filament binding activity and microfilament motor activity. Involved in several processes, including actin cytoskeleton organization; myeloid cell differentiation; and negative regulation of actin filament severing. Acts upstream of or within actin filament-based movement. Located in several cellular components, including actin cytoskeleton; immunological synapse; and myosin II filament. Part of myosin II complex. Colocalizes with COP9 signalosome. Implicated in several diseases, including auditory system disease (multiple); autosomal dominant Alport syndrome; blood platelet disease (multiple); end stage renal disease; and orofacial cleft. Biomarker of MYH-9 related disease.

NR:

description
PREDICTED: myosin-9-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24156 True 2517 lncRNA 0.44 2 2075160 2078850

Neighbor

gene id symbol gene type direction distance location
rangap1a rangap1,rangap1a,LOC107745514,LOC107722837 coding upstream 64729 2002679 ~ 2010431 (+)
LOC122333258 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 133367 1925747 ~ 1941793 (+)
LOC122330213 plbd1,LOC107563730,LOC107572281,LOC107672894 coding upstream 204550 1867624 ~ 1870610 (+)
LOC122332958 NA coding upstream 345163 1728370 ~ 1729997 (+)
LOC122329718 LOC107575253,LOC107595184,LOC107748256,LOC107740842,LOC107718680 coding upstream 347467 1711295 ~ 1727693 (+)
si:ch211-106h11.3 LOC107691099,LOC107708266,LOC107755605,LOC107563746,LOC107672933,LOC107574113 coding downstream 52368 2131218 ~ 2140821 (+)
LOC122341668 LOC107755616,LOC107672923 coding downstream 182760 2261610 ~ 2267508 (+)
LOC122341669 LOC107745245,LOC107575245,LOC107755608,LOC107672924 coding downstream 188738 2267588 ~ 2270464 (+)
LOC122333376 NA coding downstream 214453 2293303 ~ 2296045 (+)
LOC122341568 LOC107672927,LOC107755614,LOC107742419,LOC107712223 coding downstream 244850 2323700 ~ 2340093 (+)
G16219 myh9,LOC107745511,LOC107672897,LOC107691111 non-coding upstream 5445 2063565 ~ 2069715 (+)
G16226 NA non-coding upstream 19160 2050185 ~ 2056000 (+)
G16243 LOC107755616,LOC107672923 non-coding upstream 28776 2043651 ~ 2046384 (+)
G16233 NA non-coding upstream 44317 2028394 ~ 2030843 (+)
LOC122330717 NA non-coding upstream 131431 1942689 ~ 1943729 (+)
G16241 NA non-coding downstream 63377 2142227 ~ 2143806 (+)
G16218 ddx39ab,LOC107563749,LOC107755611,LOC107672936,LOC107708265,LOC107691101,LOC107563747 non-coding downstream 65019 2143869 ~ 2150485 (+)
G16246 NA non-coding downstream 113236 2192086 ~ 2243135 (+)
G16240 NA non-coding downstream 163436 2242286 ~ 2302128 (+)
G16239 NA non-coding downstream 164507 2243357 ~ 2244932 (+)
trnar-ccu_2 NA other upstream 209375 1865713 ~ 1865785 (+)
G16002 pick1,LOC107734822,LOC107734770 other upstream 209931 1619312 ~ 1865229 (+)
trnar-ccu_1 NA other upstream 424432 1650656 ~ 1650728 (+)
G16003 pick1,LOC107734822,LOC106607154 other upstream 425666 1559387 ~ 1649494 (+)
G16223 txn2,LOC107745512 other downstream 33187 2112037 ~ 2114339 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other downstream 81496 2160346 ~ 2165693 (+)
G16347 NA other downstream 489234 2568084 ~ 2568999 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 562296 2641146 ~ 2646756 (+)
G16530 LOC107601546 other downstream 1204140 3282990 ~ 3283656 (+)

Expression


Co-expression Network