G16357


Basic Information

Item Value
gene id G16357
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2631795 ~ 2634380 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24310
tggaaaatgttttataaaagacGTCACGTTTTTACTCAAGTTTCTGAATTATGTACAGGACACAGAGCGATTGGAAAACAGCTGTGAGTGACTGGATGTATTCATGTTTCTGTTGTTCCCTCTTTCACGATGGCCATGGCGAGGTTACGGGCCAGAGCCAGTCGCAGGAGCTCCGTCTTCGTGGACTCAAAATCTTCATCCTGAAACGCAGCAGAAAATGACATGCTAATTCACAACTAATACGCTTCCCTCGGATGTTCTGGATGATTTGTACCTGGTCTGTCTGGTTCGAGTCTTTGGTCCCAGAGTTCAGCTCCTCCAGACAGGACATGAGCTCATACGTCTGATCCACCGAGAAGATCAccttcacacacaaacagagtgCTTTAAGCAAAACGCCGCTAACGGTCCGGTTTCACAGATTAAGCAGCTATTGCACAAACCAGCCAGCGTCATTTCAAAGAAGCAGCGGCAGCGCGTCGGTCAGCAGGGTCATCCACAGGCTGCGCGGGGCGATCCTCGCCGTCATGAGGGACAGCAGCAGTCGGGCCGCCTCGGAGAAACGCTTCTCGCCGTAAAGCCTGTGAAACTCACGATCCGCAGGACTTTAACGGCTTTGCGCCCGGTGTCGAGCGGGACTCTCTCGATCTGCAGCTCCAGATACACACGACCGAACTCGGGACAGTGATCGAAGTAATCCACCGCCAGCTGCcacacacacacacacacacacacgtatgatGAGTACAAGATCCTCAGCAGTTTATTATTACTGGTgcagattataaataaataatgattcattGAATGGGAGTCATTGTTAAAATGATAgtaaatgggggaaaaaaaattctaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24310 True 861 lncRNA 0.36 4 2631795 2634380

Neighbor

gene id symbol gene type direction distance location
gga3b gga3,LOC107751623,LOC107677341,LOC107751620,LOC107696338,LOC107573175 coding upstream 4675 2617272 ~ 2627120 (+)
LOC122341564 LOC107569685,LOC107751621,LOC107696336,LOC107573174 coding upstream 15822 2609239 ~ 2615973 (+)
LOC122333418 NA coding upstream 46817 2579542 ~ 2584978 (+)
LOC122342193 NA coding upstream 66840 2564887 ~ 2564955 (+)
evplb evplb,LOC107741346,LOC107677338,LOC107567223,LOC107696334,LOC107751618 coding upstream 89257 2513221 ~ 2542538 (+)
jpt1b hn1,LOC107696352,LOC107751437,LOC107677345,LOC107751632,LOC107565162,LOC107728178 coding downstream 13109 2647489 ~ 2658946 (+)
LOC122341575 LOC107678271,LOC107553656 coding downstream 635213 3269593 ~ 3272366 (+)
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding downstream 642789 3277169 ~ 3280555 (+)
LOC122333486 LOC107695665,LOC107601563 coding downstream 767046 3401426 ~ 3407130 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding downstream 775397 3409777 ~ 3415087 (+)
G16358 NA non-coding upstream 29258 2601838 ~ 2602537 (+)
G16344 NA non-coding upstream 65952 2564488 ~ 2565843 (+)
G16337 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311,LOC107571948 non-coding upstream 84892 2516512 ~ 2546903 (+)
G16327 LOC107741352,LOC107677336,LOC107567222,LOC107568146,LOC107696350 non-coding upstream 197283 2426408 ~ 2434512 (+)
G16227 NA non-coding upstream 257717 2314300 ~ 2374078 (+)
G16484 LOC107755608,LOC107563769,LOC107755618,LOC107565149,LOC107695670,LOC107575431 non-coding downstream 26495 2660875 ~ 2667259 (+)
G16492 LOC107696342,LOC107565150,LOC107563773,LOC107565157,LOC107579404,LOC107565149,LOC107755607,LOC107755606 non-coding downstream 64900 2699280 ~ 2702201 (+)
G16529 NA non-coding downstream 642019 3276399 ~ 3276980 (+)
G16549 NA non-coding downstream 744901 3379281 ~ 3379545 (+)
G16556 NA non-coding downstream 750168 3384548 ~ 3476586 (+)
G16347 NA other upstream 62796 2568084 ~ 2568999 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other upstream 311657 2024348 ~ 2320138 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other upstream 466102 2160346 ~ 2165693 (+)
G16223 txn2,LOC107745512 other upstream 517456 2112037 ~ 2114339 (+)
trnar-ccu_2 NA other upstream 766010 1865713 ~ 1865785 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other downstream 6766 2641146 ~ 2646756 (+)
G16530 LOC107601546 other downstream 648610 3282990 ~ 3283656 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other downstream 686440 3320820 ~ 3323054 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other downstream 875696 3510076 ~ 3526914 (+)
LOC122332297 NA other downstream 1174790 3809170 ~ 3813344 (+)

Expression


Co-expression Network