G16530 (LOC107601546)


Basic Information

Item Value
gene id G16530
gene name LOC107601546
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3282990 ~ 3283656 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24591
ACAAAAGCCAGCTTTCTTGTCAGGTAGTTTGAAGAGCTGTTTGCGAGCGACTGGTTTTCTTCTCTCACTGTTGCTCCTGAACTCCTGAAACTACTTTCTCAGATCATCGGAGGGGTTTGACTGAATCAAGATGATCGTCGAAGCTCTTCTTCTCACATTAGCTGCTCTAGGGCAGAATCACAAAGCTGCTTCTTCAGGACGGATACATCCACTGGACATGGCACAGAATTCAGCTGACGATCGATATACGGGTTGTGCAGAGAAGATGGCCGACTTGgtgaaaacaaaatatcttgAGAAGGAAAGATCTGCCTCAGCTGAATATAATAAGACTTGGCAAGAAGGTGAACAGAAAGCCAAGAAAGCAGAGGATGGCCTGCAACAGGTTCATTCAGTTTCTATTCACGTTTACACTAACAAAGACTCTAGTGTATACAGTAACTTCACGGTGCTACTCGTACTGACAAACAGAAATACAGAG

Function

NR:

description
PREDICTED: ecto-ADP-ribosyltransferase 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24591 True 481 TUCP 0.40 3 3282990 3283656

Neighbor

gene id symbol gene type direction distance location
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding upstream 2435 3277169 ~ 3280555 (+)
LOC122341575 LOC107678271,LOC107553656 coding upstream 10624 3269593 ~ 3272366 (+)
LOC122341572 LOC107751626,LOC107565147,LOC107696345 coding upstream 591478 2349775 ~ 2691512 (+)
jpt1b hn1,LOC107696352,LOC107751437,LOC107677345,LOC107751632,LOC107565162,LOC107728178 coding upstream 624044 2647489 ~ 2658946 (+)
gga3b gga3,LOC107751623,LOC107677341,LOC107751620,LOC107696338,LOC107573175 coding upstream 655870 2617272 ~ 2627120 (+)
LOC122333486 LOC107695665,LOC107601563 coding downstream 117770 3401426 ~ 3407130 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding downstream 126121 3409777 ~ 3415087 (+)
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding downstream 202496 3486152 ~ 3490051 (+)
tmem220 tmem220,LOC107570714,LOC107579199 coding downstream 545993 3829649 ~ 3831319 (+)
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding downstream 591670 3875326 ~ 3877867 (+)
G16529 NA non-coding upstream 6010 3276399 ~ 3276980 (+)
G16492 LOC107696342,LOC107565150,LOC107563773,LOC107565157,LOC107579404,LOC107565149,LOC107755607,LOC107755606 non-coding upstream 580789 2699280 ~ 2702201 (+)
G16484 LOC107755608,LOC107563769,LOC107755618,LOC107565149,LOC107695670,LOC107575431 non-coding upstream 615731 2660875 ~ 2667259 (+)
G16357 NA non-coding upstream 648610 2631795 ~ 2634380 (+)
G16358 NA non-coding upstream 680453 2601838 ~ 2602537 (+)
G16549 NA non-coding downstream 95625 3379281 ~ 3379545 (+)
G16556 NA non-coding downstream 100892 3384548 ~ 3476586 (+)
G16575 NA non-coding downstream 256760 3540416 ~ 3540798 (+)
G16576 NA non-coding downstream 257301 3540957 ~ 3541640 (+)
G16589 NA non-coding downstream 285136 3568792 ~ 3569146 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 636234 2641146 ~ 2646756 (+)
G16347 NA other upstream 713991 2568084 ~ 2568999 (+)
G16222 LOC107751969,LOC107745511,LOC107572814,LOC107672897 other upstream 962852 2024348 ~ 2320138 (+)
LOC122333054 LOC107708263,LOC107691115,LOC107755610,LOC107563748,LOC107672908 other upstream 1117297 2160346 ~ 2165693 (+)
G16223 txn2,LOC107745512 other upstream 1168651 2112037 ~ 2114339 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other downstream 37164 3320820 ~ 3323054 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other downstream 226420 3510076 ~ 3526914 (+)
LOC122332297 NA other downstream 525514 3809170 ~ 3813344 (+)
G16667 NA other downstream 663967 3947623 ~ 3985611 (+)
G16672 NA other downstream 685859 3969515 ~ 4033526 (+)

Expression


Co-expression Network