G16604 (LOC107710983,LOC107695695,LOC107696365,LOC107718935)


Basic Information

Item Value
gene id G16604
gene name LOC107710983,LOC107695695,LOC107696365,LOC107718935
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3606172 ~ 4061550 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24698
CGCCTGCGAATGCTGTCTAGCTAGGCGGCTCACTGGGGTTTGAGACGCGGCCCACGGCGCGCTTTGAAAgcgaaaggaaaaaaaaaaaaaacgtgcaacATAAGGACACCAGCACGTGCTCCCGGTGCGGCCGcatcacaacaacaacaacaataacagcgAAGATGAGGAGCGCGGAGAGGATGAAGGTTATAATAACTCACACTCGCGGCAGCTGCAGGGGTGGCGCCCCCCGCCGCAGGAACACCCCGTCCACGAACACCCCGTTTTTGCCCAGACAGCGCAGGTAGAACTCTCCCGAGCCCGTGTCCTCGGCGGCGGCGGTGAAGATCTCCAGGTGCCGGCGGGAGATGAAGCTCGAGTGGCCCATGCTCACGTCCACCGAGCCCTGCGACGAGTTCCGACCCACCGTCACCGAGCGCTTCTTCATCACGTACTCAAACTCGCGGCCCTCCAGGCGGGCCACCGCTGCCATCGTTATCTTTCCGCGCGCACGGAGCGGGGCACGATATATATGAATGGGGGGAAAAATATGAAGGGGTGGTGAAACGTTAAACGTGCCCGACCGGAGACACCAGCATCAGCGGCGGCGACTCGACCCACCGCCGCGATTCACCGCACAGAGAAAGGGAAGGGGGCCTTAGCCAATCAAAGCGCGCCGGCGAAGGGGGCGCTGTGATTGACAGGCACGCGGGCCAATCGGCGGCGCGCTAGGGGATGCGGTAATTCAACTGCGACCAATGAAACGAGGCCTATGGGAGACCAGACGGATTGAAGGTCGGTTGCGCTGTGCCTCAACACGCATGTGTGTGGAGAGTTGTCAACGCTGGACTGGAGATTTGTCATGGACGTGAAACGGCTTTATAATATTACGGCAATGATAAATTATCGAAGAAAAATAATGCAGTGAAAATCCGGCAAtcgcaaataaaaacaaaagcaacgcTTTACCATTTAAGACTTGCATTGCATTCGCTTTATATTCTATTCACTGGctttttctattctgttctatgcATGTAGgcataaaataactaaaaaagcaacttattttctttctttctttaaaaaaggtCTCTAAGtagctctttttttaatttatatataataataataataataat

Function

NR:

description
PREDICTED: forkhead box protein K2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24698 True 1124 lncRNA 0.52 2 3606172 4061550

Neighbor

gene id symbol gene type direction distance location
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding upstream 116121 3486152 ~ 3490051 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding upstream 191085 3409777 ~ 3415087 (+)
LOC122333486 LOC107695665,LOC107601563 coding upstream 199042 3401426 ~ 3407130 (+)
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding upstream 325617 3277169 ~ 3280555 (+)
LOC122341575 LOC107678271,LOC107553656 coding upstream 333806 3269593 ~ 3272366 (+)
cfap70 cfap70,LOC107735674 coding downstream 60209 4121759 ~ 4134915 (+)
hmox2b LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258 coding downstream 74320 4135870 ~ 4145083 (+)
coro7 coro7,LOC107601580,LOC107715621,LOC107553663,LOC107695655,LOC108276516,LOC108431934 coding downstream 93520 4155070 ~ 4274967 (+)
pam16 pam16,LOC106601835,LOC107695711 coding downstream 213648 4275198 ~ 4276673 (+)
tfap4 tfap4,LOC105021644,LOC107553667,LOC107695712,LOC107601578,LOC107715644,LOC107718566,LOC107661646 coding downstream 256109 4317659 ~ 4328198 (+)
G16598 LOC106601484 non-coding upstream 7969 3594677 ~ 3598203 (+)
G16589 NA non-coding upstream 37026 3568792 ~ 3569146 (+)
G16576 NA non-coding upstream 64532 3540957 ~ 3541640 (+)
G16575 NA non-coding upstream 65374 3540416 ~ 3540798 (+)
G16556 NA non-coding upstream 129586 3384548 ~ 3476586 (+)
G16883 LOC106606498,LOC106592966 non-coding downstream 88032 4149582 ~ 4150963 (+)
G16890 LOC107601582,LOC107695709,LOC107715639,LOC107718560,LOC107661641,LOC107553664 non-coding downstream 154313 4215863 ~ 4219429 (+)
G16897 NA non-coding downstream 253581 4315131 ~ 4315467 (+)
G16898 NA non-coding downstream 255286 4316836 ~ 4317051 (+)
G16956 NA non-coding downstream 350127 4411677 ~ 4441048 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 79258 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 283118 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 322516 3282990 ~ 3283656 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 959416 2641146 ~ 2646756 (+)
G16347 NA other upstream 1037173 2568084 ~ 2568999 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 295482 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 375738 4437288 ~ 4438201 (+)
G16979 NA other downstream 397148 4458698 ~ 4462274 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other downstream 409182 4470732 ~ 4546567 (+)
G16981 NA other downstream 844106 4905656 ~ 4906966 (+)

Expression


Co-expression Network