G16623


Basic Information

Item Value
gene id G16623
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3745907 ~ 3804511 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24739
agtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtgtggagtgtgtgtggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtctggcCTGGACCGGCTGAGTTTCTGCTGGCGTTGAGTCCCTGACCGTCCCCGTGCTGGTCCTGTCTCCTGAACGCCCCCTTCTGGCCACCGCTGGGACTGCTGCCGTGTCCAGAGCCTGGAGAACCGCCggcgtcctcctcctcctccttacGCCCAGCTGCTTTTAAACAATCGTAGTTTTCCTCCGTTAAAGCCACTCGCGCGCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24739 True 311 lncRNA 0.59 2 3745907 3804511

Neighbor

gene id symbol gene type direction distance location
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding upstream 255856 3486152 ~ 3490051 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding upstream 330820 3409777 ~ 3415087 (+)
LOC122333486 LOC107695665,LOC107601563 coding upstream 338777 3401426 ~ 3407130 (+)
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding upstream 465352 3277169 ~ 3280555 (+)
LOC122341575 LOC107678271,LOC107553656 coding upstream 473541 3269593 ~ 3272366 (+)
tmem220 tmem220,LOC107570714,LOC107579199 coding downstream 25138 3829649 ~ 3831319 (+)
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding downstream 70815 3875326 ~ 3877867 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding downstream 90757 3895268 ~ 3901449 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding downstream 107498 3912009 ~ 3916436 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding downstream 123837 3928348 ~ 3938422 (+)
G16598 LOC106601484 non-coding upstream 147704 3594677 ~ 3598203 (+)
G16589 NA non-coding upstream 176761 3568792 ~ 3569146 (+)
G16576 NA non-coding upstream 204267 3540957 ~ 3541640 (+)
G16575 NA non-coding upstream 205109 3540416 ~ 3540798 (+)
G16556 NA non-coding upstream 269321 3384548 ~ 3476586 (+)
G16639 LOC107570712,LOC107573119,LOC107663479,LOC107553614,LOC107750165,LOC107673185,LOC107716258 non-coding downstream 34359 3838870 ~ 3861285 (+)
G16651 NA non-coding downstream 77389 3881900 ~ 3882705 (+)
G16664 NA non-coding downstream 140090 3944601 ~ 3945039 (+)
LOC122341104 NA non-coding downstream 183015 3987526 ~ 3991553 (+)
G16675 NA non-coding downstream 214022 4018533 ~ 4023201 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 218993 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 422853 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 462251 3282990 ~ 3283656 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 1099151 2641146 ~ 2646756 (+)
G16347 NA other upstream 1176908 2568084 ~ 2568999 (+)
LOC122332297 NA other downstream 4659 3809170 ~ 3813344 (+)
G16667 NA other downstream 143112 3947623 ~ 3985611 (+)
G16672 NA other downstream 165004 3969515 ~ 4033526 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 552521 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 632777 4437288 ~ 4438201 (+)

Expression


Co-expression Network