LOC122332297


Basic Information

Item Value
gene id LOC122332297
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3809170 ~ 3813344 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24749
CGGCTATTTACTTCGCAGACTTAAATTCACTACAGTCTTCGTTCGTCTGTAGAAAGCATTCGCACGTGTTCTACTGCACAACGGACAGGGCGTCTCATTTTCACGTACTTTGTTTCCCGCCGTGGAGTAAACCAGTGCAACCTGTTTTAGGGTGAGGCGACGCTGGGGAAAGAAGGAGCGAGACGCACAAAAATACAAGCCTCGACCAGGACTGCAGCAAGGTGCTGTTCTTGGAGAGGGAGGAGGGTTGCACCGGAGATTCTCTCTGACTGTACCCTCTGTGGTCTTTTGAGGTCGGGGTCggtagctgagctgaaccagacgGCCGCAGGagtgcagaggatggattcTACAATGGCCGAGTagaaatgttgacatttttgacaAGCCGCGACGAGCTAAAAGGAGGCCGGTGTGTTCGGATCAGCCTCTGCACGTTATCCCGggtgctctaaatggttgctagggcgtggcttgacaccttcacagcgatcccgagactttgattggttagcccacccccacgtcatTTTCATGCAAAGTTATTTTGATTCGCGAAATTCTACGGATGGATTCTACGATGGCCGACATTTTTGAGGCCCGAGGAAGACTGTCCGGGATCTCAGCGGCGGACTGGACCGGATTCGGGAGAAAGTAATTAGCTCCTAATTAATTAGGTCCCAGTCTCTTTTAAGTGCAGTGTGGTCCTAGCTAGGCCCGTATTGACTGATCACAGCGACGATGGCTTCACTCAGACGCCGGCGTGGGAGCATCGATCATCCTCCTGACATGCTAGCTGATGTTATTAATCTCCAAGAAGAATTGAATAAACTTCAAAAGGACGTTTTACCAGAATGCGACAAGCATATGCAGAAAACTAGGGACCTCTTcaatgactttaaaaatgttcacaGACTTGTCACTTACGCCACGAAAGGAGCAGTACTGACTGGCTATCTCGGGGTGGTGTTAATAGCATTAGCTTTGTTGGTAgttgatgaagatgaagagttGTATGATATTTTTGCTGGAGCGGGGGCAGTTATGAGCGCCGTTGCCATGTTATGCGTTGCTTTTAGGCAATTCGGGAAAACGcagaaggggaaaaaattaaaacgaGCAATTAACGAGGAGCTCAAAGAATTTCGGGATAAATACAGCCTTGTTGTTGACGTAGTGGAAAAAATCGGTCGGTGTACAGAGAAAATACTGCGAGACGCTTTCGTAGCAGACCACAAAGCCCGGGCGTTAAGTCAACGCTTCACCTTCTCTTTTGAGAAAGGTCTCTTTCAGAAGGACGACGTGTCTAAAATTGGCCGTTTGTCTGGGAACCTTTCAGAGATGATCGCCAAGGTTGCCTCTGTGCCTGATATCCTCAAGGAGATTGTGGGAGAATCGGCACGTGGGCCTGTACGTAAGaaggaggttaaggagaaagcAGAGAAGTGTATTACTGATGTTCAGAAAGGAATCCGTCAGATTAAAAATTCAGTGAAAGACACCATCCAAACAATAGA
>XM_043229612.1
GTATCGGACAGCGCTGTCACCTACATCCGTCTTCTCCTCGGCTATTTACTTCGCAGACTTAAATTCACTACAGTCTTCGTTCGTCTGTAGAAAGCATTCGCACGTGTTCTACTGCACAACGGACAGGGCGTCTCATTTTCACGTACTTTGTTTCCCGCCGTGGAGTAAACCAGTGCAACCTGTTTTAGGGTGAGGCGACGCTGGGGAAAGAAGGAGCGAGACGCACAAAAATACAAGCCTCGACCAGGACTGCAGCAAGGTGCTGTTCTTGGAGAGGGAGGAGGGTTGCACCGGAGATTCTCTCTGACTGTACCCTCTGTGGTCTTTTGAGGTCGGGGTCggtagctgagctgaaccagacgGCCGCAGGagtgcagaggatggattcTACAATGGCCGAGTagaaatgttgacatttttgacaAGCCGCGACGAGCTAAAAGGAGGCCGGTGTGTTCGGATCAGCCTCTGCACGTTATCCCGAGCTGATGTTATTAATCTCCAAGAAGAATTGAATAAACTTCAAAAGGACGTTTTACCAGAATGCGACAAGCATATGCAGAAAACTAGGGACCTCTTcaatgactttaaaaatgttcacaGACTTGTCACTTACGCCACGAAAGGAGCAGTACTGACTGGCTATCTCGGGGTGGTGTTAATAGCATTAGCTTTGTTGGTAgttgatgaagatgaagagttGTATGATATTTTTGCTGGAGCGGGGGCAGTTATGAGCGCCGTTGCCATGTTATGCGTTGCTTTTAGGCAATTCGGGAAAACGcagaaggggaaaaaattaaaacgaGCAATTAACGAGGAGCTCAAAGAATTTCGGGATAAATACAGCCTTGTTGTTGACGTAGTGGAAAAAATCGGTCGGTGTACAGAGAAAATACTGCGAGACGCTTTCGTAGCAGACCACAAAGCCCGGGCGTTAAGTCAACGCTTCACCTTCTCTTTTGAGAAAGGTCTCTTTCAGAAGGACGACGTGTCTAAAATTGGCCGTTTGTCTGGGAACCTTTCAGAGATGATCGCCAAGGTTGCCTCTGTGCCTGATATCCTCAAGGAGATTGTGGGAGAATCGGCACGTGGGCCTGTACGTAAGaaggaggttaaggagaaagcAGAGAAGTGTATTACTGATGTTCAGAAAGGAATCCGTCAGATTAAAAATTCAGTGAAAGACACCATCCAAACAATAGAGACAACATCAGAGCTTTTGTATTCAatctgactatatatat
>XM_043229621.1
ATCGGACAGCGCTGTCACCTACATCCGTCTTCTCCTCGGCTATTTACTTCGCAGACTTAAATTCACTACAGTCTTCGTTCGTCTGTAGAAAGCATTCGCACGTGTTCTACTGCACAACGGACAGGGCGTCTCATTTTCACGTACTTTGTTTCCCGCCGTGGAGTAAACCAGTGCAACCTGTTTTAGGGTGAGGCGACGCTGGGGAAAGAAGGAGCGAGACGCACAAAAATACAAGCCTCGACCAGGACTGCAGCAAGGTGCTGTTCTTGGAGAGGGAGGAGGGTTGCACCGGAGATTCTCTCTGACTGTACCCTCTGTGGTCTTTTGAGGTCGGGGTCggtagctgagctgaaccagacgGCCGCAGGagtgcagaggatggattcTACAATGGCCGAGTagaaatgttgacatttttgacaAGCCGCGACGAGCTAAAAGGAGGCCGGTGTGTTCGGATCAGCCTCTGCACGTTATCCCGGTAAGGGTGTCGTTTTttcacccccatgtctctgatCCAAacatacccatctgaaccattataacggcagtctatgggatctgttgctagggtgctctaaatggttgctagggcgtggcttgacaccttcacagcgatcccgagactttgattggttagcccacccccacgtcatTTTCATGCAAAGTTATTTTGATTCGCGAAATTCTACGGATGGATTCTACGATGGCCGACATTTTTGAGGCCCGAGGAAGACTGTCCGGGATCTCAGCGGCGGACTGGACCGGATTCGGGAGAAAGTAATTAGCTCCTAATTAATTAGGTCCCAGTCTCTTTTAAGTGCAGTGTGGTCCTAGCTAGGCCCGTATTGACTGATCACAGCGACGATGGCTTCACTCAGACGCCGGCGTGGGAGCATCGATCATCCTCCTGACATGCTAGCTGATGTTATTAATCTCCAAGAAGAATTGAATAAACTTCAAAAGGACGTTTTACCAGAATGCGACAAGCATATGCAGAAAACTAGGGACCTCTTcaatgactttaaaaatgttcacaGACTTGTCACTTACGCCACGAAAGGAGCAGTACTGACTGGCTATCTCGGGGTGGTGTTAATAGCATTAGCTTTGTTGGTAgttgatgaagatgaagagttGTATGATATTTTTGCTGGAGCGGGGGCAGTTATGAGCGCCGTTGCCATGTTATGCGTTGCTTTTAGGCAATTCGGGAAAACGcagaaggggaaaaaattaaaacgaGCAATTAACGAGGAGCTCAAAGAATTTCGGGATAAATACAGCCTTGTTGTTGACGTAGTGGAAAAAATCGGTCGGTGTACAGAGAAAATACTGCGAGACGCTTTCGTAGCAGACCACAAAGCCCGGGCGTTAAGTCAACGCTTCACCTTCTCTTTTGAGAAAGGTCTCTTTCAGAAGGACGACGTGTCTAAAATTGGCCGTTTGTCTGGGAACCTTTCAGAGATGATCGCCAAGGTTGCCTCTGTGCCTGATATCCTCAAGGAGATTGTGGGAGAATCGGCACGTGGGCCTGTACGTAAGaaggaggttaaggagaaagcAGAGAAGTGTATTACTGATGTTCAGAAAGGAATCCGTCAGATTAAAAATTCAGTGAAAGACACCATCCAAACAATAGAGACAACATCAGAGCTTTTGTATTCAatctgactatatatat
>XM_043229629.1
ATCGGACAGCGCTGTCACCTACATCCGTCTTCTCCTCGGCTATTTACTTCGCAGACTTAAATTCACTACAGTCTTCGTTCGTCTGTAGAAAGCATTCGCACGTGTTCTACTGCACAACGGACAGGGCGTCTCATTTTCACGTACTTTGTTTCCCGCCGTGGAGTAAACCAGTGCAACCTGTTTTAGGGTGAGGCGACGCTGGGGAAAGAAGGAGCGAGACGCACAAAAATACAAGCCTCGACCAGGACTGCAGCAAGGTGCTGTTCTTGGAGAGGGAGGAGGGTTGCACCGGAGATTCTCTCTGACTGTACCCTCTGTGGTCTTTTGAGGTCGGGGTCggtagctgagctgaaccagacgGCCGCAGGagtgcagaggatggattcTACAATGGCCGAGTagaaatgttgacatttttgacaAGCCGCGACGAGCTAAAAGGAGGCCGGTGTGTTCGGATCAGCCTCTGCACGTTATCCCGggtgctctaaatggttgctagggcgtggcttgacaccttcacagcgatcccgagactttgattggttagcccacccccacgtcatTTTCATGCAAAGTTATTTTGATTCGCGAAATTCTACGGATGGATTCTACGATGGCCGACATTTTTGAGGCCCGAGGAAGACTGTCCGGGATCTCAGCGGCGGACTGGACCGGATTCGGGAGAAAGTAATTAGCTCCTAATTAATTAGGTCCCAGTCTCTTTTAAGTGCAGTGTGGTCCTAGCTAGGCCCGTATTGACTGATCACAGCGACGATGGCTTCACTCAGACGCCGGCGTGGGAGCATCGATCATCCTCCTGACATGCTAGCTGATGTTATTAATCTCCAAGAAGAATTGAATAAACTTCAAAAGGACGTTTTACCAGAATGCGACAAGCATATGCAGAAAACTAGGGACCTCTTcaatgactttaaaaatgttcacaGACTTGTCACTTACGCCACGAAAGGAGCAGTACTGACTGGCTATCTCGGGGTGGTGTTAATAGCATTAGCTTTGTTGGTAgttgatgaagatgaagagttGTATGATATTTTTGCTGGAGCGGGGGCAGTTATGAGCGCCGTTGCCATGTTATGCGTTGCTTTTAGGCAATTCGGGAAAACGcagaaggggaaaaaattaaaacgaGCAATTAACGAGGAGCTCAAAGAATTTCGGGATAAATACAGCCTTGTTGTTGACGTAGTGGAAAAAATCGGTCGGTGTACAGAGAAAATACTGCGAGACGCTTTCGTAGCAGACCACAAAGCCCGGGCGTTAAGTCAACGCTTCACCTTCTCTTTTGAGAAAGGTCTCTTTCAGAAGGACGACGTGTCTAAAATTGGCCGTTTGTCTGGGAACCTTTCAGAGATGATCGCCAAGGTTGCCTCTGTGCCTGATATCCTCAAGGAGATTGTGGGAGAATCGGCACGTGGGCCTGTACGTAAGaaggaggttaaggagaaagcAGAGAAGTGTATTACTGATGTTCAGAAAGGAATCCGTCAGATTAAAAATTCAGTGAAAGACACCATCCAAACAATAGAGACAACATCAGAGCTTTTGTATTCAatctgactatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24749 False 1517 TUCP 0.38 4 3809208 3813303
XM_043229612.1 False 1247 mRNA 0.47 3 3809170 3813344
XM_043229621.1 True 1684 mRNA 0.48 3 3809172 3813344
XM_043229629.1 False 1594 mRNA 0.48 4 3809172 3813344

Neighbor

gene id symbol gene type direction distance location
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding upstream 319119 3486152 ~ 3490051 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding upstream 394083 3409777 ~ 3415087 (+)
LOC122333486 LOC107695665,LOC107601563 coding upstream 402040 3401426 ~ 3407130 (+)
LOC122333469 LOC107576979,LOC107673194,LOC107716248 coding upstream 528615 3277169 ~ 3280555 (+)
LOC122341575 LOC107678271,LOC107553656 coding upstream 536804 3269593 ~ 3272366 (+)
tmem220 tmem220,LOC107570714,LOC107579199 coding downstream 16305 3829649 ~ 3831319 (+)
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding downstream 61982 3875326 ~ 3877867 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding downstream 81924 3895268 ~ 3901449 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding downstream 98665 3912009 ~ 3916436 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding downstream 115004 3928348 ~ 3938422 (+)
G16623 NA non-coding upstream 4659 3745907 ~ 3804511 (+)
G16598 LOC106601484 non-coding upstream 210967 3594677 ~ 3598203 (+)
G16589 NA non-coding upstream 240024 3568792 ~ 3569146 (+)
G16576 NA non-coding upstream 267530 3540957 ~ 3541640 (+)
G16575 NA non-coding upstream 268372 3540416 ~ 3540798 (+)
G16639 LOC107570712,LOC107573119,LOC107663479,LOC107553614,LOC107750165,LOC107673185,LOC107716258 non-coding downstream 25526 3838870 ~ 3861285 (+)
G16651 NA non-coding downstream 68556 3881900 ~ 3882705 (+)
G16664 NA non-coding downstream 131257 3944601 ~ 3945039 (+)
LOC122341104 NA non-coding downstream 174182 3987526 ~ 3991553 (+)
G16675 NA non-coding downstream 205189 4018533 ~ 4023201 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 282256 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 486116 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 525514 3282990 ~ 3283656 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 1162414 2641146 ~ 2646756 (+)
G16347 NA other upstream 1240171 2568084 ~ 2568999 (+)
G16667 NA other downstream 134279 3947623 ~ 3985611 (+)
G16672 NA other downstream 156171 3969515 ~ 4033526 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 543688 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 623944 4437288 ~ 4438201 (+)
G16979 NA other downstream 645354 4458698 ~ 4462274 (+)

Expression


Co-expression Network