G16651


Basic Information

Item Value
gene id G16651
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3881900 ~ 3882705 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24780
TCAGTACTCCATCTGCTTTATTTGTTCCAAAACATACGTTTTGGTATGATAAACCATAGATAAAGATGTTCATGACACGAGTGCATTCATTTCTATACACAATTTATAATGCCAGTGAATTATTTGGAAATAACAAGCACTCTGCTTGACGTGGTTCATCTGGCATTTCATTCTCAGTAATTGGCACGGCCACAATAAAACAAccataaacaacataaaacataaaaatatacagaaatatatttataatatataggaTTCAGTTTCAATCTTAACTTAAGAATATACACATAGTCCTCGAAAGGAAGTTGCAATACAGTACTACAGAGAAAAATGAATGCTGATTACTTTAGTAAATAAAGAAGTCAGCAATAATAGAGAAAAAGACATGAAATGTACATTAACGAATTGTTCATTTAAGTATCAAAATAGgctttttataaatacataggAAAAATATGCAACGCATACTTTTTGAGTCACCTGAAGTAGAATCTCTAAGGTGCCGTCTTTTTAGATACAGATACCACGGTAAGGTGCAACAGTCTCTGCTTAATAATTATCCAGACCAAAAAAATACCTTGTTCATCATTCGTGCCAGACATGTTTCAGACCAGAAAACCTCCGCCCagttaaaaaaagttcagtCAGATCTTTCAGAAAGCGCCGACCGCTTCGCTCTTAGCAGATCTCCTCTTCTCGGCGCGTTTCCAAATTTTCCATTTCACTCGTCCGGTCCATATCGATAGGGCCTGCTTACCAGGAGTCCCGTTAAAATCAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24780 True 784 lncRNA 0.36 2 3881900 3882705

Neighbor

gene id symbol gene type direction distance location
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding upstream 4033 3875326 ~ 3877867 (+)
tmem220 tmem220,LOC107570714,LOC107579199 coding upstream 50581 3829649 ~ 3831319 (+)
tmem100a tmem100a,LOC107601598,LOC107710980,LOC107696362,LOC107695692,LOC107718941,LOC107567563 coding upstream 391849 3486152 ~ 3490051 (+)
cbx2 cbx2,LOC107695690,LOC107710978,LOC107696361,LOC107718939,LOC107571836,LOC107601561 coding upstream 466813 3409777 ~ 3415087 (+)
LOC122333486 LOC107695665,LOC107601563 coding upstream 474770 3401426 ~ 3407130 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding downstream 12563 3895268 ~ 3901449 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding downstream 29304 3912009 ~ 3916436 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding downstream 45643 3928348 ~ 3938422 (+)
LOC122333504 LOC107695702,LOC107724673,LOC107601588,LOC107673211,LOC107553654,LOC107716264 coding downstream 65127 3947832 ~ 3950655 (+)
cfap70 cfap70,LOC107735674 coding downstream 239054 4121759 ~ 4134915 (+)
G16639 LOC107570712,LOC107573119,LOC107663479,LOC107553614,LOC107750165,LOC107673185,LOC107716258 non-coding upstream 20615 3838870 ~ 3861285 (+)
G16619 NA non-coding upstream 60473 3800652 ~ 3821427 (+)
G16623 NA non-coding upstream 77389 3745907 ~ 3804511 (+)
G16598 LOC106601484 non-coding upstream 283697 3594677 ~ 3598203 (+)
G16589 NA non-coding upstream 312754 3568792 ~ 3569146 (+)
G16664 NA non-coding downstream 61896 3944601 ~ 3945039 (+)
LOC122341104 NA non-coding downstream 104821 3987526 ~ 3991553 (+)
G16675 NA non-coding downstream 135828 4018533 ~ 4023201 (+)
G16685 NA non-coding downstream 136542 4019247 ~ 4019689 (+)
G16686 NA non-coding downstream 141493 4024198 ~ 4035062 (+)
LOC122332297 NA other upstream 68556 3809170 ~ 3813344 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 354986 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 558846 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 598244 3282990 ~ 3283656 (+)
sumo2b sumo2,sumo2b,LOC108411789,LOC103045390,LOC108441874 other upstream 1235144 2641146 ~ 2646756 (+)
G16667 NA other downstream 64918 3947623 ~ 3985611 (+)
G16672 NA other downstream 86810 3969515 ~ 4033526 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 474327 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 554583 4437288 ~ 4438201 (+)
G16979 NA other downstream 575993 4458698 ~ 4462274 (+)

Expression


Co-expression Network