G16686


Basic Information

Item Value
gene id G16686
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4024198 ~ 4035062 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24831
TCTCTGTCACCGAACTCTTCTGCATGGTTCACAAGAGCTTCTTTGACGGTTTTGTATCCAACTAGGACCACGGTTTGTTTGGGACCCAGAAAGACTTGGAATATGTTCCCGTGCTCGTGCTTCACCGTCCTGTACCCAGCTCTAGTATCTCTGTCACCGAACTCTTCTGCATGGTTCACAAGAGCTTCTTTGACGGTTTTGTATCCAACTAGGACCACGGTTTGTTTGGGACCCAGAAAGACTTGGAATATGTTCCCGTAGGTTTTAGAGAGCTaaaaaaagtgtcaaagGGTCTTTTTAGGTCAAGGGTCAGCAGGTTCCCCACCAGTGGAAGCGGTTTTGGTCCCGGTGGCTCTTTCCCTCCTTTCTGAGATTTGGATCCAGAAGAAAGCAAATACAAAACCAGAAGCAAAAGCAAAGTTCCCAGTAATGTACCTGTGCTGGGAAACTGCAGCAGAGACTCGACAAAAGCCATTTTCTCTCTGAGCTCCTCAACTGATTCAC

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process
GO:0070279 vitamin B6 binding molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG:

id description
ko00450 Selenocompound metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU24831 True 504 lncRNA 0.47 3 4024198 4035062

Neighbor

gene id symbol gene type direction distance location
LOC122333504 LOC107695702,LOC107724673,LOC107601588,LOC107673211,LOC107553654,LOC107716264 coding upstream 73543 3947832 ~ 3950655 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding upstream 85776 3928348 ~ 3938422 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding upstream 107762 3912009 ~ 3916436 (+)
sstr5 sstr5,LOC107601569,LOC107695669,LOC107673199,LOC107716263 coding upstream 122749 3895268 ~ 3901449 (+)
mrps7 mrps7,LOC107695700,LOC107673207,LOC107724659,LOC107579769,LOC108262546 coding upstream 146331 3875326 ~ 3877867 (+)
cfap70 cfap70,LOC107735674 coding downstream 86697 4121759 ~ 4134915 (+)
hmox2b LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258 coding downstream 100808 4135870 ~ 4145083 (+)
coro7 coro7,LOC107601580,LOC107715621,LOC107553663,LOC107695655,LOC108276516,LOC108431934 coding downstream 120008 4155070 ~ 4274967 (+)
pam16 pam16,LOC106601835,LOC107695711 coding downstream 240136 4275198 ~ 4276673 (+)
tfap4 tfap4,LOC105021644,LOC107553667,LOC107695712,LOC107601578,LOC107715644,LOC107718566,LOC107661646 coding downstream 282597 4317659 ~ 4328198 (+)
G16675 NA non-coding upstream 997 4018533 ~ 4023201 (+)
G16685 NA non-coding upstream 4509 4019247 ~ 4019689 (+)
LOC122341104 NA non-coding upstream 32645 3987526 ~ 3991553 (+)
G16664 NA non-coding upstream 79159 3944601 ~ 3945039 (+)
G16651 NA non-coding upstream 141493 3881900 ~ 3882705 (+)
G16693 abca3b,abca3,LOC107678264,LOC107718613,LOC107553624,LOC107742093,LOC107601545 non-coding downstream 7810 4042872 ~ 4043399 (+)
G16883 LOC106606498,LOC106592966 non-coding downstream 114520 4149582 ~ 4150963 (+)
G16890 LOC107601582,LOC107695709,LOC107715639,LOC107718560,LOC107661641,LOC107553664 non-coding downstream 180801 4215863 ~ 4219429 (+)
G16897 NA non-coding downstream 280069 4315131 ~ 4315467 (+)
G16898 NA non-coding downstream 281774 4316836 ~ 4317051 (+)
G16667 NA other upstream 38587 3947623 ~ 3985611 (+)
LOC122332297 NA other upstream 210854 3809170 ~ 3813344 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 497284 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 701144 3320820 ~ 3323054 (+)
G16530 LOC107601546 other upstream 740542 3282990 ~ 3283656 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 321970 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 402226 4437288 ~ 4438201 (+)
G16979 NA other downstream 423636 4458698 ~ 4462274 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other downstream 435670 4470732 ~ 4546567 (+)
G16981 NA other downstream 870594 4905656 ~ 4906966 (+)

Expression


Co-expression Network