G16883 (LOC106606498,LOC106592966)


Basic Information

Item Value
gene id G16883
gene name LOC106606498,LOC106592966
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4149582 ~ 4150963 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU25143
ATGCCCGTCCCGTTGCAGCTGGCGCAGTGCTGGACTTTGGACCCGGGCTCATGACCTCTGCCCCCGCAGCGCTGGCACGCGTCCTCTATGTGCACGGTTATCTCTTTATTCACCCCTTTAGCAGCCTGGGTGAACGTCAGCTCCATCACATACTCTCTTGTGGCTGATCGAAGATGGCGTTGAAGTCCCCAAAGCCTCGAGCGCCGGAGAACTCGCCGAAGATCTTGCGGAAAAGCTCCTCGGGGTCGATGCTGCTCCCTCTGCTCCAGTACTGCTGATGTCCCGCGCCGGCCTGACCCGCGTCGAACCCGGCCGAGCCGTACGCGTCGTACTGTTTCCTCTTCCCCTCGTCACTGAGCACC

Function

NR:

description
PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25143 True 362 lncRNA 0.62 2 4149582 4150963

Neighbor

gene id symbol gene type direction distance location
hmox2b LOC107601585,LOC107742125,LOC107695708,LOC107553648,LOC107718627,LOC107678258 coding upstream 4499 4135870 ~ 4145083 (+)
cfap70 cfap70,LOC107735674 coding upstream 14667 4121759 ~ 4134915 (+)
LOC122333504 LOC107695702,LOC107724673,LOC107601588,LOC107673211,LOC107553654,LOC107716264 coding upstream 198927 3947832 ~ 3950655 (+)
LOC122340641 LOC107724675,LOC107673198,LOC107601590,LOC107695672,LOC107716262,LOC107553642 coding upstream 211160 3928348 ~ 3938422 (+)
LOC122341043 LOC107716255,LOC107673187,LOC107695671,LOC107724671 coding upstream 233146 3912009 ~ 3916436 (+)
coro7 coro7,LOC107601580,LOC107715621,LOC107553663,LOC107695655,LOC108276516,LOC108431934 coding downstream 4107 4155070 ~ 4274967 (+)
pam16 pam16,LOC106601835,LOC107695711 coding downstream 124235 4275198 ~ 4276673 (+)
tfap4 tfap4,LOC105021644,LOC107553667,LOC107695712,LOC107601578,LOC107715644,LOC107718566,LOC107661646 coding downstream 166696 4317659 ~ 4328198 (+)
srl srl,LOC107661647,LOC107718567,LOC107553668,LOC107695714 coding downstream 178723 4329686 ~ 4351760 (+)
LOC122340833 LOC107718621 coding downstream 319769 4470732 ~ 4479122 (+)
G16604 LOC107710983,LOC107695695,LOC107696365,LOC107718935 non-coding upstream 88032 3606172 ~ 4061550 (+)
G16693 abca3b,abca3,LOC107678264,LOC107718613,LOC107553624,LOC107742093,LOC107601545 non-coding upstream 106183 4042872 ~ 4043399 (+)
G16686 NA non-coding upstream 114520 4024198 ~ 4035062 (+)
G16675 NA non-coding upstream 126381 4018533 ~ 4023201 (+)
G16685 NA non-coding upstream 129893 4019247 ~ 4019689 (+)
G16890 LOC107601582,LOC107695709,LOC107715639,LOC107718560,LOC107661641,LOC107553664 non-coding downstream 64900 4215863 ~ 4219429 (+)
G16897 NA non-coding downstream 164168 4315131 ~ 4315467 (+)
G16898 NA non-coding downstream 165873 4316836 ~ 4317051 (+)
G16956 NA non-coding downstream 260714 4411677 ~ 4441048 (+)
G16958 NA non-coding downstream 291053 4442016 ~ 4442308 (+)
G16672 NA other upstream 116056 3969515 ~ 4033526 (+)
G16667 NA other upstream 163971 3947623 ~ 3985611 (+)
LOC122332297 NA other upstream 336238 3809170 ~ 3813344 (+)
mmd mmd,LOC107695694,LOC107710982,LOC107601597,LOC107567562,LOC107696363,LOC107718937 other upstream 622668 3510076 ~ 3526914 (+)
G16541 LOC107553655,LOC107673212,LOC107601591,LOC107716265 other upstream 826528 3320820 ~ 3323054 (+)
LOC122340527 adcy9,LOC107715643,LOC107661757,LOC107695715,LOC107576850,LOC107718568 other downstream 206069 4357032 ~ 4405384 (+)
G16955 crebbp,LOC108440697 other downstream 286325 4437288 ~ 4438201 (+)
G16979 NA other downstream 307735 4458698 ~ 4462274 (+)
G16978 LOC107601574,LOC107654242,LOC107715645 other downstream 319769 4470732 ~ 4546567 (+)
G16981 NA other downstream 754693 4905656 ~ 4906966 (+)

Expression


Co-expression Network