G16257


Basic Information

Item Value
gene id G16257
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6515121 ~ 6515398 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU18175
TTTAGATGCTATTTTCACTAAGTACAAATAGCAATAGATGCTATTTACACTAAGTGAAAATAGCAATATATTCTATTTACACCATGTAAAAGTATCAGTTCTTTGCAATAAGAGTAAATAGTAATTAGATGCCATCTATACTTTATATTGGCAGATACTATTTGCACCTTAGTATTTTTGTACATTAACAGAGTGTAAATGATTATATTTATTAAAATTACTAAATGGATACTGCCTTATTGGGAGAATAAAAACCCTCCCTACACCTTCCCATAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18175 True 278 lncRNA 0.29 1 6515121 6515398

Neighbor

gene id symbol gene type direction distance location
CI01000001_06484769_06502296 CCDC30 coding upstream 10972 6484769 ~ 6504149 (+)
CI01000001_06474891_06479887 USP21 coding upstream 35096 6474891 ~ 6480025 (+)
CI01000001_06458769_06470107 ARHGEF3L coding upstream 44626 6458769 ~ 6470495 (+)
CI01000001_06442969_06455699 UBA1 coding upstream 59262 6442969 ~ 6455859 (+)
CI01000001_06420606_06430104 CAMKVL coding upstream 84988 6420606 ~ 6430133 (+)
CI01000001_06519105_06525958 NA coding downstream 3235 6518633 ~ 6526120 (+)
CI01000001_06531852_06539325 TTC34 coding downstream 16454 6531852 ~ 6539493 (+)
CI01000001_06541966_06547403 NA coding downstream 26568 6541966 ~ 6547745 (+)
CI01000001_06564886_06568295 NA coding downstream 49488 6564886 ~ 6568295 (+)
CI01000001_06583486_06641365 PAX7, PAX7B, PAX7A coding downstream 68088 6583486 ~ 6641365 (+)
G16247 NA non-coding upstream 81793 6433084 ~ 6433328 (+)
G16212 NA non-coding upstream 232569 6282339 ~ 6282552 (+)
G16193 NA non-coding upstream 287976 6226859 ~ 6227145 (+)
G16189 NA non-coding upstream 306341 6208552 ~ 6208780 (+)
G16188 NA non-coding upstream 306767 6207632 ~ 6208354 (+)
G16284 NA non-coding downstream 156784 6672182 ~ 6673511 (+)
CI01000001_06718133_06747744 KCNAB2.L, KCNAB2A, KCNAB2B, KCNAB2 non-coding downstream 208411 6717159 ~ 6747744 (+)
G16317 NA non-coding downstream 284770 6800168 ~ 6800381 (+)
CI01000001_06893068_06917387 IFFO2A non-coding downstream 400389 6893068 ~ 6917660 (+)
G16937 NA non-coding downstream 420744 6936142 ~ 6946151 (+)
G15995 NA other upstream 800170 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 1225165 5279837 ~ 5287698 (+)
G15794 NA other upstream 1450417 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2893670 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4844117 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1017174 7531541 ~ 7540586 (+)
G17234 NA other downstream 1516726 8032124 ~ 8032483 (+)
G17353 NA other downstream 2700624 9216022 ~ 9228859 (+)
G17354 NA other downstream 2719065 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 2902930 9435836 ~ 9436373 (+)

Expression


Co-expression Network