fbxw9 (fbxw9,LOC107661857)


Basic Information

Item Value
gene id fbxw9
gene name fbxw9,LOC107661857
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6098201 ~ 6103626 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU25994
CCGGAGAAGTGTAGTGTTGACAAGCGTCGCTTTGAGATCAATGTAACTGTAATCATATTTTCTCCGATGATCAAAAATACGTTTCGCGCTTCTATGATTTTCCTTTTACATTCTCTGCCTACTTTTAACAAGCGTGAGGAAAAACTTAAGTAAAGACACGGCGAACACAGATGATTTTGTGCAGTGTCATatcaaaatgatcaataatttataacaaaaacaGTCGGATGAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATC
>XM_043234865.1
GAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagAGTTAATAGGTTTAATGTGAATATCAGAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATCAGTGTGCTGCCACAGGTATGTCAGACCCTGGGAAAGCATGAGGATCGCTTGGCGTGGCAGCTTCGGGCTCAAATCGGGCCCAAAGCATCTTTCCCAGCCGGGCCGAAGGAGGATTTCGACTGGTCCAAGGCATGTTTGGAAATGGAgcagctgattggctgctggACGGGGCACGAGAATCATGCGGAGACACAGGACGAGGCAGCTGTCGGGGTGAACAGCGAAAACTTGGTGGAGATGCAGCTGGATGTCGAGGTAAACGCTGCAGCGCGGGCGGGAGAAGACGACGTACGAGTTCAGTCCCAGAGTGCCTCTGACGGTCCCCATCTGACCGAGTCATCCGGCACTTCTTCACCCCTGGAGCACATCGTCCTTCCCTCCGGCCACATTGCAGATGTGAATTGCGTCCTCCTGTTGGGCGGAGAAGAGGCGCTGTGTGCCTCCGGCTCGAGGGACCGAAACGTGAACCTGTGGGACCTCCGAGAGGGCCCCAGAGGCAAGCTGATGCACACTCTTGCGGGGCGCGGGACCATTAGCACCCACCGGGGCTGGGTGTGGTGCCTGGCGTCCAGCGGACCTCTGCTGGCGCCTGGCTCTCTTGACAGCACCGTCAGGCTCTGGGATCTGGAAGCCGGAGGAGCAGAGCGGGGACTCATCCAGTGCAAAGCTGCTGTATTGTGTCTGTCCTGCGAGAGGGACACGGTGCTGGCTGGGTCACATGACCAGAAATTAAGCATCTTTGACACCCGAGCCGCAGACCCATTGGTCAAGAGTCTCCGTCTTCACGGTGATGCTGTGTTGTGCCTGGCGTCTGATGACCAGTACATCCTGTCCGGCAGTAAAGACCATACCGTGGCTCTGTTCGACCGCAGGGCGGGAAAACTCCTGCAGAAAGTCCAGCTGAGCTCGTACCTGCTGTCTCTGTCCTGCAGCGGCCGGGAGGTGTGGGGGGATAACCGTGGACTCGCGCACACCTTCTCCCTGCACGGCAGCTCCCTGGCGCCCGTGTCCCAGTTCAACATCCACCGCTCACTGGTCACCGGCGTTCACTACTCTACTGGAGCTCTCTACACGTGCTCCTCCGACCGCACCATCAAGGTCCACCTTCCGTGTGCTCCACCCAAGACCCTGTGTACCCTTCACCATCAGGCAGGAGTTAACGGGTACTTAAGTGTTGAAGGAGGAACGCTGGCCATCGCCTCCGGTGACATGAACGTGGAAGTCTGGAGGCCCGAGATGCTGAGGGTCTGA

Function

symbol description
fbxw9 Orthologous to human FBXW9 (F-box and WD repeat domain containing 9).

NR:

description
PREDICTED: F-box/WD repeat-containing protein 9 isoform X2

GO: NA

KEGG:

id description
K10265 FBXW9; F-box and WD-40 domain protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
TU25994 False 552 TUCP 0.44 3 6098201 6099152
XM_043234865.1 True 1601 mRNA 0.58 12 6098430 6103626

Neighbor

gene id symbol gene type direction distance location
LOC122341440 fbxw9,LOC107661857 coding upstream 143559 5949149 ~ 5954642 (+)
slc25a19 slc25a19,LOC107661860,LOC107563233,LOC107565621,LOC107653449,LOC107718625 coding upstream 155615 5937432 ~ 5942586 (+)
amdhd2 amdhd2,LOC107661858,LOC107718599,LOC107653464,LOC107753757 coding upstream 164554 5925229 ~ 5933647 (+)
tufm tufm,LOC107718598,LOC107659578,LOC107731475,LOC101070424,LOC106931188 coding upstream 276309 5817043 ~ 5821892 (+)
gcdhb gcdhb,gcdh,LOC107718595,LOC107653471,LOC107731476,LOC107563244,LOC102794743 coding upstream 517460 5574401 ~ 5580741 (+)
dhps dhps,LOC107661880,LOC107563249,LOC107653447,LOC106592861 coding downstream 2807 6106433 ~ 6110339 (+)
prkar1b prkar1b,LOC107661853,LOC107653458 coding downstream 108965 6212591 ~ 6265327 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding downstream 172272 6275898 ~ 6293394 (+)
ccdc137 NA coding downstream 196200 6299826 ~ 6303823 (+)
btbd17b btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241 coding downstream 201072 6304698 ~ 6308852 (+)
G17405 LOC107661884,LOC107753766,LOC107565624,LOC107718602 non-coding upstream 150493 5945293 ~ 5947708 (+)
G17337 NA non-coding upstream 345921 5751981 ~ 5752280 (+)
G17312 LOC107550264,LOC107659563,LOC107653452,LOC107563254,LOC107718634 non-coding upstream 361076 5735089 ~ 5737125 (+)
G17322 NA non-coding upstream 402565 5690535 ~ 5695636 (+)
G17315 NA non-coding upstream 450122 5647245 ~ 5648079 (+)
G17412 NA non-coding downstream 9580 6113206 ~ 6113606 (+)
G17414 NA non-coding downstream 12078 6115704 ~ 6116092 (+)
G17449 NA non-coding downstream 163771 6267397 ~ 6267696 (+)
G17521 NA non-coding downstream 212642 6316268 ~ 6316621 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding downstream 242910 6346536 ~ 6353825 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 135313 5957403 ~ 5962888 (+)
G17302 NA other upstream 499969 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 532227 5557008 ~ 5565974 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other upstream 617594 5415758 ~ 5480607 (+)
elof1 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058,LOC103384163 other upstream 785830 5310493 ~ 5312371 (+)
LOC122341437 LOC107718607,LOC107653460 other downstream 83182 6186808 ~ 6195038 (+)
G17590 NA other downstream 401289 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1479728 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1552405 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1704617 7808243 ~ 7821078 (+)

Expression


Co-expression Network