LOC122341437 (LOC107718607,LOC107653460)


Basic Information

Item Value
gene id LOC122341437
gene name LOC107718607,LOC107653460
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6186808 ~ 6195038 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26034
GGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaac
>TU26037
GGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGGTCGCGCTCCCGTCACGCTTTAAAAAACGACAGCGCGCGCGGCAGCGGCAGCCACTGAAACCGCGCGCTTTGTGTCTTGTCTGTCTTTGCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaac
>TU26040
GGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGTGAGAACGCGACACAGAGCTTTGCCGAACCGCGTGCTTTGCCATCCTCACCCCCCCCTGCGTGTGTTTCCCTCCCCCAGGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGGTCGCGCTCCCGTCACGCTTTAAAAAACGACAGCGCGCGCGGCAGCGGCAGCCACTGAAACCGCGCGCTTTGTGTCTTGTCTGTCTTTGCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaac
>TU26041
GGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGTGAGAACGCGACACAGAGCTTTGCCGAACCGCGTGCTTTGCCATCCTCACCCCCCCCTGCGTGTGTTTCCCTCCCCCAGGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaac
>XM_043234810.1
ACATAGTTATAGCCCATATATGGCGCTAACAGGAAGTCAACTGCTCTGGCCATGTGGAAATTTGCATTGCTCTCTTTCCACATTTGCAGAAAAAGCGTGACATTTGTGACATTTCTAGGGCTTTATTAACGGAGACCTTCTTTACggtttattattttaacgtTTATTTAACGATTTAATCCCGGGTGGTCTATATAggaatatataattattcatagGGTAAATACAATGCGTAAATTGATCTGTAGGCCTACCGAAATGTATCTGGCGTGAAGGAATCTTGTTGGTTTTACGTCCGAATGAAGTGACGGCGAGTAACGGGGCGGTGCTGCCGGTGAAGaccacgacacacacacacacagacccggGTGAATGACAGATGCGCGTTTGAGGACAGCAAATCATCTGCGCGCACACTATTTCCTACAGCATGTGGATATAGCGCGATCTATGTCGCTGGAGTCGTTACCGTTCAATTACCAGACAAAACGGGGAACGATCACGCGACTCGCGTCTGCGCGTGCAACGAACATCACGGCGCATCCGCGGGGAAGCAAAGCCTTTATTTGATTTCGCTCACGGAGCCTGCATCGTGACATAAAGGCTGCTCCAGCTGTGCGCCGAGAACATGGACAGCTACGAGGCTTTCTGCGCACGCGCGCGGTCGGAAATGATGCGCGAGAGGAGCTGCAGCGGCGCACCTGCGCGAGAGGTGGCGCACTCGCTCGTCTGCTTCCACGGCAGGCCGGCTTTGTCTCCTGTTCtcaatgagaaagaaagaagggagatGGTTGAATACAAGAAAAGAGCTTCTCAAATGGAGGCCGAGAGACAGATTCATTACAACAAAAACCTCCTCAATCAGATTCAGACCATTCTTTggacaaataagGCACCAAAAATATTGGATGTGCCAAAGCCTCCAGAGCAGTGCCTGTCTCCATCCCCTAAAGCAGACTACAGGAATGGCTTCACAGTACCTGATGCCGCAAACATTACACATTCTGCGGCCACAGAGCCGTACGTCTTTTCTCACAAGCAACCGGTGACCCCCTCAGCTGAGGTGCTCGGGCTTAGGAGAAGAAAATCGTCAGAAGAAAAACAACCGCAAGAGGAAATTCAAATGGAAGGAGTTTGTCTGCAGAACCTTCTGAAGAAATCCCGTGAATTTATCGAGAGAGAGCAAAGTAAACAGGGCGCAAAGGTCATCGGCAACACAGCAGCTGATCAAAGCAGGATCGTCCCCGAAAGCCCGTCGGAGAAAGAAAACGGCTGTGCTTTGAACGGGACGGCCTTTGGTTTACCCTTCTATATTCCTTCACCGAACCAGACCTCACCGAGTAACCTGATAAGCCCAGAAGCTGCCAGTCTAATCGGCAGGCCCCACCGCGGACGCCCTCGTCCCATTTCCGCCGGGAACATCTTCTTCTCATTCCCCGAAAACCCCAGCCGACCCGACGTCACGGCAAACGCAAGGCCGCCGGAAAGGATGCTGCTCGGGGTGGAAAACGCGAGCGCGGGCCGGTCCGACGATCGCTCCAGGCTGAATGAGGCCACGGGACGATTGGACGCGTCTCCGGTGGATCCCGAGCTCGCCAGCCCTCTGTTTCGGAGGAGATGCCACACGCTGGACAGCCACCTGTCCTCGCGCCATCAGAGTCCCGTCATAGACAGGAGTCAGGAGAGGATGCCCCGCTTCATGGCCGGGGTGACTGCCAGAACGCCTACTCGGCTGTCTCCTCCTTCACCCATGAACAAGACTTTCACGCGGGACAGTCCTGTAGCGGCATTTATGGGGTCGGGGGTCACCCCAGACTCTCCTTCTCACGCCAGACTCCCCtttgagacagagagaaacagtgTTGTGGGCTCAGCACTGAAAGAAAGGAGAACAGATGAGATGCAATGGCAAGTCCACGCTCTGGAAGACATGCAGCGATCTCTGGAGGACGATTATGTTTTCCGGATGTCGCGTCTGATGGCCGAACAAGAGAGGGAGCAACTGCACCTCGGTCAGGAGTCGGAGGAGCGGGTCAGGAGACTGAGGGCTCAGGGCGGTCTGAGTCCTGTCGCGGGCGAGGACGGCTGTGAATTAAGGGCCGCTGGTGAACGCTACCCCATACTGAGCCCCATGTGCCCTTTAAGCCCAGGAGACAGATCGCCAAGAAACCCTGTGCCTGCCATTGGTTTCCCTTCGAGCGCTTTAGACGCGCTGTCGCCCTCGAAACAGACTCCCGTTTATATGCGAGGCCCGAATCACGCGAGAAACAGACTcagccagGCGTTCACGGAGGAGCAGCAGAGGGCGCTGTGTCACCTCACGGCCACCGCGAAGGGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaaccATAATGTTTGATaaa

Function

NR:

description
PREDICTED: centriolar coiled-coil protein of 110 kDa-like isoform X1

GO: NA

KEGG:

id description
K16453 CCP110, CEP110; centrosomal protein CEP110

RNA

RNA id representative length rna type GC content exon number start site end site
TU26034 False 1083 TUCP 0.43 7 6192740 6195022
TU26037 False 1175 TUCP 0.43 6 6192740 6195022
TU26040 False 1255 TUCP 0.41 5 6192740 6195022
TU26041 False 1163 TUCP 0.56 6 6192740 6195022
XM_043234810.1 True 3434 mRNA 0.52 14 6186808 6195038

Neighbor

gene id symbol gene type direction distance location
dhps dhps,LOC107661880,LOC107563249,LOC107653447,LOC106592861 coding upstream 76469 6106433 ~ 6110339 (+)
LOC122341440 fbxw9,LOC107661857 coding upstream 232166 5949149 ~ 5954642 (+)
slc25a19 slc25a19,LOC107661860,LOC107563233,LOC107565621,LOC107653449,LOC107718625 coding upstream 244222 5937432 ~ 5942586 (+)
amdhd2 amdhd2,LOC107661858,LOC107718599,LOC107653464,LOC107753757 coding upstream 253161 5925229 ~ 5933647 (+)
tufm tufm,LOC107718598,LOC107659578,LOC107731475,LOC101070424,LOC106931188 coding upstream 364916 5817043 ~ 5821892 (+)
prkar1b prkar1b,LOC107661853,LOC107653458 coding downstream 17553 6212591 ~ 6265327 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding downstream 80860 6275898 ~ 6293394 (+)
ccdc137 NA coding downstream 104788 6299826 ~ 6303823 (+)
btbd17b btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241 coding downstream 109660 6304698 ~ 6308852 (+)
LOC122333921 LOC107693566,LOC107599328,LOC107673775,LOC107693569,LOC107599331,LOC107653436,LOC107565605,LOC107661871 coding downstream 133836 6328874 ~ 6339401 (+)
G17414 NA non-coding upstream 70716 6115704 ~ 6116092 (+)
G17412 NA non-coding upstream 73202 6113206 ~ 6113606 (+)
G17405 LOC107661884,LOC107753766,LOC107565624,LOC107718602 non-coding upstream 239100 5945293 ~ 5947708 (+)
G17337 NA non-coding upstream 434528 5751981 ~ 5752280 (+)
G17312 LOC107550264,LOC107659563,LOC107653452,LOC107563254,LOC107718634 non-coding upstream 449683 5735089 ~ 5737125 (+)
G17449 NA non-coding downstream 72359 6267397 ~ 6267696 (+)
G17521 NA non-coding downstream 121230 6316268 ~ 6316621 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding downstream 151498 6346536 ~ 6353825 (+)
G17524 NA non-coding downstream 222624 6417662 ~ 6418363 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding downstream 241694 6436732 ~ 6436968 (+)
fbxw9 fbxw9,LOC107661857 other upstream 83182 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 223920 5957403 ~ 5962888 (+)
G17302 NA other upstream 588576 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 620834 5557008 ~ 5565974 (+)
nfil3-2 nfil3-2,LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 other upstream 706201 5415758 ~ 5480607 (+)
G17590 NA other downstream 309877 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1388316 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1460993 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1613205 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1643918 7838956 ~ 7841669 (+)

Expression


Co-expression Network