G17524


Basic Information

Item Value
gene id G17524
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6417662 ~ 6418363 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26186
TTTAAAAGATGTGACTTTTATTGGCTCCAACAATAATTTCGCAACACAAGTGtgagtaactgtttttatttcacggtATGTCACTGTTGCTTTGCCTTTAAAAGATTGTTTGATTTGTACTGAgtatttatgcagttttaagCTAAACCACAGTAACGTTCATTTGTGAAGGATTTAGTCAAACAAGTTTACTTCCGAGTCTACAAACttttaatgtataaatctcaataacATATAAGTAGATCAGAGGCCTCTTTAAGCATActaatatttaagtaaaataagtaGTAACTAAAGAGTAGGGGTGggacaaaatattaattagacaatatATCTTCATCCTTCTCCGTATGATATGATATCATACCACCaatatcaaaatatacataataaggactatacatgcacaaatacaaataagttTTTTGCTCACGTGGTTATAATGTGAAGCAGGCATACACAGTAACAGTCAATTTTTAGCTATTGTGAAAAGTTAAAACTTGGTCATTACAGTAAGTAAGCACCCGGTAAGGAAGTAAAAGCCTGTGAATCAGataatgacaaataaagaaaaaatcagGATAAAGCTGACATTTCTCCACTTCACAACAGAATGTCAGACAGAAGTTTCTTTCTCTTCAACGG

Function

NR:

description
PREDICTED: upstream stimulatory factor 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26186 True 645 lncRNA 0.36 2 6417662 6418363

Neighbor

gene id symbol gene type direction distance location
LOC122333921 LOC107693566,LOC107599328,LOC107673775,LOC107693569,LOC107599331,LOC107653436,LOC107565605,LOC107661871 coding upstream 78261 6328874 ~ 6339401 (+)
btbd17b btbd17b,LOC107753750,LOC107653455,LOC107565606,LOC107661851,LOC107718610,LOC107563241 coding upstream 108810 6304698 ~ 6308852 (+)
ccdc137 NA coding upstream 113839 6299826 ~ 6303823 (+)
pdgfab LOC107718638,LOC107653445,LOC107753752,LOC107563229,LOC107661852 coding upstream 124268 6275898 ~ 6293394 (+)
prkar1b prkar1b,LOC107661853,LOC107653458 coding upstream 152335 6212591 ~ 6265327 (+)
LOC122341451 LOC107673774,LOC107599333 coding downstream 24494 6442857 ~ 6444787 (+)
si:dkey-120c6.5 LOC107661876,LOC107602705,LOC107711171 coding downstream 27586 6445949 ~ 6449763 (+)
btr02 btr02,LOC107602701,LOC107711172,LOC107722891,LOC107599333,LOC107661870,LOC107673779 coding downstream 31532 6449895 ~ 6455698 (+)
cldnk cldnk,LOC107673780,LOC107602706,LOC107599294,LOC107711173,LOC107661843,LOC105910960 coding downstream 36676 6455039 ~ 6458981 (+)
hgs hgs,LOC107661832,LOC107673777 coding downstream 42382 6460745 ~ 6473566 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding upstream 63837 6346536 ~ 6353825 (+)
G17521 NA non-coding upstream 101041 6316268 ~ 6316621 (+)
G17449 NA non-coding upstream 149966 6267397 ~ 6267696 (+)
G17414 NA non-coding upstream 301570 6115704 ~ 6116092 (+)
G17412 NA non-coding upstream 304056 6113206 ~ 6113606 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding downstream 18369 6436732 ~ 6436968 (+)
G17584 NA non-coding downstream 56736 6475099 ~ 6475619 (+)
G17630 NA non-coding downstream 205325 6623688 ~ 6625296 (+)
G17662 NA non-coding downstream 286051 6704414 ~ 6704702 (+)
G17663 NA non-coding downstream 286832 6705195 ~ 6705405 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 222624 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 314036 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 454774 5957403 ~ 5962888 (+)
G17302 NA other upstream 819430 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 851688 5557008 ~ 5565974 (+)
G17590 NA other downstream 86552 6504915 ~ 6556750 (+)
LOC122331592 LOC107744988 other downstream 1164991 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1237668 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1389880 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1420593 7838956 ~ 7841669 (+)

Expression


Co-expression Network