G17590


Basic Information

Item Value
gene id G17590
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6504915 ~ 6556750 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26266
agaggaggggcgtggtattggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgcgatggacctcaccccgccgtccgagaagtgcgtcgtgggacccccgtagtccaggctgtgagcacacagctcatcccactctgccgccggagcaaagaaacgacggagacgccgcggaagaagccgccgcccctcgcgccccgggccagaaaaaggggagcgcgtgcgaccgccggactccgccccttacctggacccttcccccctggaacacggcctcaaccttcactttccccgcggcacgacgaggacaccagatccccccttttatttggacacttttcccctggacactttattattttgtattattatttattttgttaataaaagcctctccgaggcctgacgcaa
>TU26270
agaggaggggcgtggtattggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgcgatggacctcaccccgccgtccgagaagtgcgtcgtgggacccccgtagtccaggctgtgagcacacagctcatcccactctgccgccggagcaaagaaacgacggagacgccgcggaagaagccgccgcccctcgcgccccgggccagaaaaaggggagcgcgtgcgaccgccggactccgccccttacctggacccttcccccctggaacacggcctcaaccttcactttccccgcggcacgacgaggacaccagatcccccttacctggacccttccccctggaacacgccccctgcagcacgacgaggacaccagttcccccgtttatCTTGGACACTTACTCTTTCCCCTGAACACgttactttgtatttttattaataaaaaagcctctccgaggcctgacgcaa

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU26266 False 526 TUCP 0.57 2 6504915 6556750
TU26270 True 583 TUCP 0.63 2 6504915 6556750

Neighbor

gene id symbol gene type direction distance location
slc25a10a si:ch1073-100f3.2,slc25a10,LOC107711196,LOC107747133,LOC107569289,LOC100693267 coding upstream 15856 6482152 ~ 6489059 (+)
mrpl12 mrpl12,LOC107661846,LOC107722894,LOC107711195,LOC107673776,LOC107599340,LOC107602707,LOC106606250 coding upstream 24813 6476709 ~ 6480102 (+)
hgs hgs,LOC107661832,LOC107673777 coding upstream 31349 6460745 ~ 6473566 (+)
cldnk cldnk,LOC107673780,LOC107602706,LOC107599294,LOC107711173,LOC107661843,LOC105910960 coding upstream 45934 6455039 ~ 6458981 (+)
btr02 btr02,LOC107602701,LOC107711172,LOC107722891,LOC107599333,LOC107661870,LOC107673779 coding upstream 49217 6449895 ~ 6455698 (+)
LOC122341958 LOC107602696,LOC107711189,LOC107661842,LOC107711141,LOC107661867,LOC103910319,LOC103910320 coding downstream 27754 6584504 ~ 6599082 (+)
LOC122341485 LOC107711141,LOC107661867,LOC107711189,LOC107602696,LOC103910319,LOC107661842,LOC107602684 coding downstream 49938 6606688 ~ 6607669 (+)
tubb4bl zgc:153426,LOC100712088,LOC103367161,LOC103468788,LOC107711200 coding downstream 57774 6614524 ~ 6618353 (+)
asf1ba asf1ba,LOC107599302,LOC107661845,LOC107602710,LOC108429686,LOC107728681,LOC107670488,LOC103026007 coding downstream 69617 6626367 ~ 6630437 (+)
prkacaa prkacaa,kapca,LOC107599301,LOC107602709,LOC107670487,LOC107661836,LOC108429687,LOC105910964,LOC107378291,LOC106606839,LOC103367163,LOC107728680 coding downstream 74247 6630997 ~ 6646901 (+)
G17584 NA non-coding upstream 29296 6475099 ~ 6475619 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 67947 6436732 ~ 6436968 (+)
G17524 NA non-coding upstream 86552 6417662 ~ 6418363 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding upstream 151090 6346536 ~ 6353825 (+)
G17521 NA non-coding upstream 188294 6316268 ~ 6316621 (+)
G17630 NA non-coding downstream 66938 6623688 ~ 6625296 (+)
G17662 NA non-coding downstream 147664 6704414 ~ 6704702 (+)
G17663 NA non-coding downstream 148445 6705195 ~ 6705405 (+)
G17683 NA non-coding downstream 290188 6846938 ~ 6847606 (+)
G17699 NA non-coding downstream 345996 6902746 ~ 6903161 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 309877 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 401289 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 542027 5957403 ~ 5962888 (+)
G17302 NA other upstream 906683 5597099 ~ 5598232 (+)
LOC122331163 LOC107653472,LOC107718593,LOC107563253 other upstream 938941 5557008 ~ 5565974 (+)
LOC122331592 LOC107744988 other downstream 1026604 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1099281 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1251493 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1282206 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 1393011 7949761 ~ 7950417 (+)

Expression


Co-expression Network