G17630


Basic Information

Item Value
gene id G17630
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6623688 ~ 6625296 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26329
TTTTTTTACGATTTTGCAACAATACCTCAAATATTTCTGCAGGAACCTCAACATGCTTCAGCTTGTCCGTTCAAGAAGCGGTCCCGTGCTAACTAAGTGCAAGCTAGAGGAGTGTGCCTCGGCTCTCGTGCTCAGATTAATCTGACGCAGCTCCACCGAGCTGTTTAAATGCGGCGAGCTCCAACGGTGATTAACAGTCCGGATGCTCTCAAAAGTTCAGTTTCGGACATGACTGCGGAGGTGGAGCGACTGACTCACCCTGGGCCGAAACATTCCTgagaagcagcagcagaaaaCTCCCTGCCAACAGCCCAACCTGCCGTATCATCTCCAGGATGGAGTCGATCCGCAACGGTGTTTCCTGAAGAATATATGCGGACTGTATATCCGACAGATCTGACCGTAGCTCGCTTCCGCCTCACCTTTCCGGTGAAACGAAGTACTTAAACCGAAACTACCGCGACTCTCCGGCGTCCtgctcataataataataataatacattgtcCTTCGGGATCCTTCCCGGCTATCAATGGTGGTCTTGTGCGCTCGGTATTTACTCGAGTGTTGAGTGAATGCTCGAGCTGGGCTCTTCTTCTTCCTAAATTCTCATCGCTGATCACATGGTTCAGTGTCGTGTTACAACACCTGAGTCCGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC108267341 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26329 True 656 lncRNA 0.46 2 6623688 6625296

Neighbor

gene id symbol gene type direction distance location
tubb4bl zgc:153426,LOC100712088,LOC103367161,LOC103468788,LOC107711200 coding upstream 5335 6614524 ~ 6618353 (+)
LOC122341485 LOC107711141,LOC107661867,LOC107711189,LOC107602696,LOC103910319,LOC107661842,LOC107602684 coding upstream 16019 6606688 ~ 6607669 (+)
LOC122341958 LOC107602696,LOC107711189,LOC107661842,LOC107711141,LOC107661867,LOC103910319,LOC103910320 coding upstream 24606 6584504 ~ 6599082 (+)
gcgra LOC107722892,LOC107661833,LOC107599297,LOC107670515 coding upstream 52998 6519336 ~ 6570690 (+)
slc25a10a si:ch1073-100f3.2,slc25a10,LOC107711196,LOC107747133,LOC107569289,LOC100693267 coding upstream 134629 6482152 ~ 6489059 (+)
asf1ba asf1ba,LOC107599302,LOC107661845,LOC107602710,LOC108429686,LOC107728681,LOC107670488,LOC103026007 coding downstream 1071 6626367 ~ 6630437 (+)
prkacaa prkacaa,kapca,LOC107599301,LOC107602709,LOC107670487,LOC107661836,LOC108429687,LOC105910964,LOC107378291,LOC106606839,LOC103367163,LOC107728680 coding downstream 5701 6630997 ~ 6646901 (+)
samd1a samd1a,LOC107728687,LOC107711202,LOC107661838,LOC107599303,LOC107670528,LOC107602714 coding downstream 24377 6649673 ~ 6656616 (+)
dnajb1a dnajb1a,LOC107711204,LOC107602716,LOC107670512,LOC107728686,LOC107599305,LOC108429690,LOC108257372 coding downstream 40681 6665977 ~ 6670009 (+)
gipc1 gipc1,LOC107670535,LOC107728688,LOC107599306,LOC107661840,LOC107602717,LOC107711205 coding downstream 44903 6670199 ~ 6678717 (+)
G17584 NA non-coding upstream 148069 6475099 ~ 6475619 (+)
G17560 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding upstream 186720 6436732 ~ 6436968 (+)
G17524 NA non-coding upstream 205325 6417662 ~ 6418363 (+)
G17528 LOC107693569,LOC107673775,LOC107661871,LOC107722887,LOC107563216,LOC107711138,LOC107572241,LOC107661873 non-coding upstream 269863 6346536 ~ 6353825 (+)
G17521 NA non-coding upstream 307067 6316268 ~ 6316621 (+)
G17662 NA non-coding downstream 79118 6704414 ~ 6704702 (+)
G17663 NA non-coding downstream 79899 6705195 ~ 6705405 (+)
G17683 NA non-coding downstream 221642 6846938 ~ 6847606 (+)
G17699 NA non-coding downstream 277450 6902746 ~ 6903161 (+)
G17704 NA non-coding downstream 296900 6922196 ~ 6976265 (+)
G17590 NA other upstream 66938 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 428650 6186808 ~ 6195038 (+)
fbxw9 fbxw9,LOC107661857 other upstream 520062 6098201 ~ 6103626 (+)
LOC122341474 dhps,LOC107661880,LOC107563249,LOC107653447,LOC107718601,LOC107563248 other upstream 660800 5957403 ~ 5962888 (+)
G17302 NA other upstream 1025456 5597099 ~ 5598232 (+)
LOC122331592 LOC107744988 other downstream 958058 7583354 ~ 7591526 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other downstream 1030735 7656031 ~ 7725519 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other downstream 1182947 7808243 ~ 7821078 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 1213660 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 1324465 7949761 ~ 7950417 (+)

Expression


Co-expression Network