G16317


Basic Information

Item Value
gene id G16317
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6800168 ~ 6800381 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU18253
CGCCCCATGACGCTTTGCGCGAATTAAGGGTGTAACTTCCGTTAAGCTGTAAACAGTCAGTGAAAGGCTCGCTCTATGAACGCAATAATAAGTTTTTTTTTAATTTTTTTTTTAAACTGGGTACAATGAGATGACATTACTCTACTCACCCTTCAACCAACGAACATTAAAAGGACATTTAAAAGTGTAAAAACATCAACAAGGTACTTTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18253 True 214 lncRNA 0.35 1 6800168 6800381

Neighbor

gene id symbol gene type direction distance location
CI01000001_06718133_06747744 KCNAB2.L, KCNAB2A, KCNAB2B, KCNAB2 coding upstream 52424 6717159 ~ 6747744 (+)
CI01000001_06700913_06706131 NA coding upstream 93745 6700811 ~ 6706423 (+)
CI01000001_06583486_06641365 PAX7, PAX7B, PAX7A coding upstream 158803 6583486 ~ 6641365 (+)
CI01000001_06564886_06568295 NA coding upstream 231873 6564886 ~ 6568295 (+)
CI01000001_06541966_06547403 NA coding upstream 252423 6541966 ~ 6547745 (+)
CI01000001_06825263_06835397 EMC1 coding downstream 24882 6825263 ~ 6836463 (+)
CI01000001_06884020_06889266 UBR4 coding downstream 83639 6884020 ~ 6889992 (+)
CI01000001_06893068_06917387 IFFO2A coding downstream 92687 6893068 ~ 6917660 (+)
CI01000001_06921000_06929478 TAS1R1 coding downstream 120619 6921000 ~ 6930359 (+)
CI01000001_06939316_06939879 NA coding downstream 138852 6939233 ~ 6940705 (+)
G16284 NA non-coding upstream 126657 6672182 ~ 6673511 (+)
G16257 NA non-coding upstream 284770 6515121 ~ 6515398 (+)
G16247 NA non-coding upstream 366840 6433084 ~ 6433328 (+)
G16212 NA non-coding upstream 517616 6282339 ~ 6282552 (+)
G16937 NA non-coding downstream 135761 6936142 ~ 6946151 (+)
G16977 NA non-coding downstream 291372 7091753 ~ 7123993 (+)
G17019 NA non-coding downstream 351713 7152094 ~ 7152425 (+)
G16970 NA non-coding downstream 478862 7279243 ~ 7284904 (+)
G15995 NA other upstream 1085217 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 1510212 5279837 ~ 5287698 (+)
G15794 NA other upstream 1735464 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 3178717 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 5129164 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 732191 7531541 ~ 7540586 (+)
G17234 NA other downstream 1231743 8032124 ~ 8032483 (+)
G17353 NA other downstream 2415641 9216022 ~ 9228859 (+)
G17354 NA other downstream 2434082 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 2617947 9435836 ~ 9436373 (+)

Expression


Co-expression Network