G17930


Basic Information

Item Value
gene id G17930
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7829484 ~ 7829860 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26760
GGGAAATTTTGCACACTTCTGCTTGCAGAACTGCTTCAGCCCAGTGACATTTGTAGGCGTTGAAGCGTGAAATGTGTTCCACAGATCCTGACACTTTAACCATACTTTGTTGGGGTTTAATTCTGGAATCTGACTGGACCATTTCAGAATTTTAGCTTTCGTTAAGGATCATTATTATTGAGCATAACCCAGTCAGGCTTCAGATGGAATATAAAAACCAGaggttttacatttacaaactaGCAAACAGTTTTTgacagttgttgttttgttttgtttattttcttatgaAATGCAGACAGAAAAGGCTTGAATATCTTCAGACATTTCTTCTTTGTGACTCCTGGAATAAttttgtgtctttctctctgacaAAG

Function

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26760 True 377 lncRNA 0.50 1 7829484 7829860

Neighbor

gene id symbol gene type direction distance location
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding upstream 21722 7801296 ~ 7807762 (+)
LOC122334406 LOC107587953 coding upstream 32831 7786116 ~ 7796653 (+)
chmp6a chmp6a,LOC107744992,LOC107599353,LOC107711234,LOC107672453,LOC108432238 coding upstream 174294 7649629 ~ 7655190 (+)
ttyh2l ttyh2l,LOC107744973,LOC107670532,LOC107599325,LOC107711233,LOC107672455,LOC107587999 coding upstream 180538 7619650 ~ 7648946 (+)
hs3st3b1a hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967 coding upstream 455020 7362916 ~ 7374464 (+)
LOC122331730 NA coding downstream 144683 7974543 ~ 7977890 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding downstream 325511 8155371 ~ 8166377 (+)
nol12 nol12,LOC107676179 coding downstream 348654 8178514 ~ 8181737 (+)
LOC122339678 NA coding downstream 354688 8184548 ~ 8189293 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding downstream 359593 8189453 ~ 8200478 (+)
G17928 NA non-coding upstream 3642 7825186 ~ 7825842 (+)
G17912 NA non-coding upstream 101300 7671703 ~ 7728184 (+)
G17867 NA non-coding upstream 419944 7409238 ~ 7409540 (+)
G17862 NA non-coding upstream 431019 7398239 ~ 7398465 (+)
G17861 NA non-coding upstream 436612 7392591 ~ 7392872 (+)
G17934 NA non-coding downstream 12479 7842339 ~ 7842968 (+)
G17936 si:dkey-210j14.3,LOC107672496,LOC107757375,LOC107711245,LOC107711244,LOC107670496 non-coding downstream 13721 7843581 ~ 7844217 (+)
G17937 NA non-coding downstream 15364 7845224 ~ 7846045 (+)
G17973 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding downstream 70051 7899911 ~ 7900147 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding downstream 86002 7915862 ~ 7923629 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other upstream 8406 7808243 ~ 7821078 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other upstream 103965 7656031 ~ 7725519 (+)
LOC122331592 LOC107744988 other upstream 237958 7583354 ~ 7591526 (+)
G17590 NA other upstream 1272734 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 1634446 6186808 ~ 6195038 (+)
LOC122341274 LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494 other downstream 9096 7838956 ~ 7841669 (+)
LOC122331768 LOC107710248 other downstream 119901 7949761 ~ 7950417 (+)
G17985 ighv4-5 other downstream 120994 7950854 ~ 7951364 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other downstream 130211 7960071 ~ 7962976 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other downstream 134889 7964749 ~ 7966194 (+)

Expression


Co-expression Network