LOC122341274 (LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494)


Basic Information

Item Value
gene id LOC122341274
gene name LOC107711242,LOC107672448,LOC107588011,LOC107757354,LOC107670494
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7838956 ~ 7841669 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26763
GATGAATTGAATGAGGTGTGACTGCTTAGGGAGACATGTTGGGAGTTCCTCAGGACCAGGATTGCAAATCTCTGGTCTAGATCATTTTCAAGCACAGAGAACAAGAGCACTCCGACCTGGTCATAATCAAAGAGGAGTGTTTTGAAGTGGACACTTATCCCAGTTATACAGGGAAAACGCCCCCAGCTTCGAGAGGACAACCAACATCTTCTGCATATGAGCCAGTGGTAGACTCAAAAAGTTTTGATGGCCATTTTGTGTCCGCCGAATTTTCAGAGCTATCGGAAATACAAAACACCTCCTCCGATTCTCAGACAAACACTCTAGGAAAAACTCCATCGATGAGGCTGTCGACCAGTTAATAGCACCAATAGAGGATCCATTGGAATTTGATGGCCACTCTATACTCAACCAGTTTTCAGTAGAGCACAATAGTGACTTTTCCTCTGAGGCTCAGGAGG
>XM_043234650.1
GTACCAAGTTGCAGAATTTGGAATAATCTTTTTTCGGTGACCAAACCAGGGTTTTATTAAGCCCGCGTTTATTTTTCTTGCATGCTAACAAAAAAAAGCGAGCGTCTCAAAAGATGTCAAAATCCCTGTCGTTTCGGTTGCAAAGTAAGCTCCATAATGGAGATAATGACCAAAACGGCAATAGAAGAAATATGCAAAATTGTAGACAGCGATTTTGCGTTTTTACGACAAGAACTGTCTCGAGTCATGGGTGAAAACACAGTTCTCAAGGACAAAATGCTCTGTTTCGGGAGCGAAAGGCACGAAGAAAGCGTCACAAAGGAAGAAGCGCGCGCTGGCTCCAAAATATATCGCTCTATTTGCGTTCAAACCGAAGACGGAGAGCAGCCCTCCATCAAAGGCATATTTGGAAAGGAGTGGTGCTCCAGTTTATGGGATCGGAGGAACGAGTCCAGAGAAGATGAGCTGGCGATCGATGTCGACCTGTACAGCGTGTCGCCTCATAAGCACAGAGAACAAGAGCACTCCGACCTGGTCATAATCAAAGAGGAGTGTTTTGAAGTGGACACTTATCCCAGTTATACAGGGAAAACGCCCCCAGCTTCGAGAGGACAACCAACATCTTCTGCATATGAGCCAGTGGTAGACTCAAAAAGTTTTGATGGCCATTTTGTGTCCGCCGAATTTTCAGAGCTATCGGAAATACAAAACACCTCCTCCGATTCTCAGACAAACACTCTAGGAAAAACTCCATCGATGAGGCTGTCGACCAGTTAA

Function

NR:

description
PREDICTED: zinc finger protein 544-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26763 False 461 lncRNA 0.45 3 7841043 7841669
XM_043234650.1 True 777 mRNA 0.45 4 7838956 7841570

Neighbor

gene id symbol gene type direction distance location
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding upstream 31194 7801296 ~ 7807762 (+)
LOC122334406 LOC107587953 coding upstream 42303 7786116 ~ 7796653 (+)
chmp6a chmp6a,LOC107744992,LOC107599353,LOC107711234,LOC107672453,LOC108432238 coding upstream 183766 7649629 ~ 7655190 (+)
ttyh2l ttyh2l,LOC107744973,LOC107670532,LOC107599325,LOC107711233,LOC107672455,LOC107587999 coding upstream 190010 7619650 ~ 7648946 (+)
hs3st3b1a hs3st3b1a,LOC107711227,LOC107672504,LOC107587963,LOC107599323,LOC107744967 coding upstream 464492 7362916 ~ 7374464 (+)
LOC122331730 NA coding downstream 132874 7974543 ~ 7977890 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding downstream 313702 8155371 ~ 8166377 (+)
nol12 nol12,LOC107676179 coding downstream 336845 8178514 ~ 8181737 (+)
LOC122339678 NA coding downstream 342879 8184548 ~ 8189293 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding downstream 347784 8189453 ~ 8200478 (+)
G17930 NA non-coding upstream 9096 7829484 ~ 7829860 (+)
G17928 NA non-coding upstream 13114 7825186 ~ 7825842 (+)
G17912 NA non-coding upstream 110772 7671703 ~ 7728184 (+)
G17867 NA non-coding upstream 429416 7409238 ~ 7409540 (+)
G17862 NA non-coding upstream 440491 7398239 ~ 7398465 (+)
G17934 NA non-coding downstream 670 7842339 ~ 7842968 (+)
G17936 si:dkey-210j14.3,LOC107672496,LOC107757375,LOC107711245,LOC107711244,LOC107670496 non-coding downstream 1912 7843581 ~ 7844217 (+)
G17937 NA non-coding downstream 3555 7845224 ~ 7846045 (+)
G17973 LOC107693569,LOC107722887,LOC107673775,LOC107563216,LOC107599327,LOC107572241,LOC107693566,LOC107661871,LOC107661873,LOC107599328 non-coding downstream 58242 7899911 ~ 7900147 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding downstream 74193 7915862 ~ 7923629 (+)
slc27a1a slc27a1a,slc27a1,LOC107670527,LOC107757377,LOC107567246,LOC107711240,LOC107672489,LOC107587997 other upstream 17878 7808243 ~ 7821078 (+)
baiap2a baiap2a,LOC107672452,LOC107711237,LOC107670476 other upstream 113437 7656031 ~ 7725519 (+)
LOC122331592 LOC107744988 other upstream 247430 7583354 ~ 7591526 (+)
G17590 NA other upstream 1282206 6504915 ~ 6556750 (+)
LOC122341437 LOC107718607,LOC107653460 other upstream 1643918 6186808 ~ 6195038 (+)
LOC122331768 LOC107710248 other downstream 108092 7949761 ~ 7950417 (+)
G17985 ighv4-5 other downstream 109185 7950854 ~ 7951364 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other downstream 118402 7960071 ~ 7962976 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other downstream 123080 7964749 ~ 7966194 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other downstream 214990 8056659 ~ 8059857 (+)

Expression


Co-expression Network