LOC122341282 (LOC107690132,LOC107722730,LOC107572760)


Basic Information

Item Value
gene id LOC122341282
gene name LOC107690132,LOC107722730,LOC107572760
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8150743 ~ 8152894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26858
TGAACGTCAACAAAAGCAGCTTAAGTCGAGGAGAGTGGTCTGGATCAGACAGCAGACTCATGTCTGGAAGATCTTCTTCAGATCCGTGGAgtggagaggaagaggaggaggaggagggagcgACAGAGCAGAGCTGAGACTCGTTCTGATTGGCCGCACGGGCTCGGGCAAGAGCGCCACAGGAAACACCATCCTCGGACGACGTCACTTCCTGTCTGCGCTGAGGGCAAGTTCGGTGACTCACGTGTGCGAATGCGGCCGAGCAGACGAAGAGTCGGCGCTGAAGAGCGTTCTCGTCGTGGACATGCCGGGATTCGGCGACACTCGCTTCGACGCGACTCACGTTCACGCAGAGATCGCTAAATGCGTAGCGCTGACGGCTCCGGGTCCGCACGCCTTCCTGCTCGTCGTCCCGCTCGGCCGCTTCACGGCAGACGAAGATCGGGTCGTCGCACAAATGCTGCGGGTGTTCGGCGAGGCGGCGCTCCGCCACACGGTGGTGCTGTTCACGCGCGGAGACGAGCTGGAGGACGGCGGCGTCCAGGGTTTCTTCGAGTCAGCTCCGGAGCGACTGAAGGTGCTTCTGCGTGACTGCGGCGGGCGATACTGCGTCTTCAACAACCGAGCGCCAGAGAACCGCACGCAAGTCAACACGCTGCTAACGATGGTGGACGGCATGGGCGGAGCTTGTTACACCAACAGCGTGTTCCTGCGCGCCGATGACGTAATACGTGATGAACAGCGGCGCCTCGGTCGCAGCAGACGCCAGGCCCTACGATCCGCACTCGGTCGCGTCCGATCAGAAGTCGCGCTCTCTGGGAAGGTTCTGGAGCGCGTCAAAGCGCTAGTCGCGGCGGGAGCCACCGGGATGGCGGTGGGGGCCGTTTTTGGG
>TU26861
TGAACGTCAACAAAAGCAGCTTAAGTCGAGGAGAGTGGTCTGGATCAGACAGCAGACTCATGTCTGGAAGATCTTCTTCAGGTGTGTTCATCTCACGAGACCTCGTCCTGATCACATCCGTGGAgtggagaggaagaggaggaggaggagggagcgACAGAGCAGAGCTGAGACTCGTTCTGATTGGCCGCACGGGCTCGGGCAAGAGCGCCACAGGAAACACCATCCTCGGACGACGTCACTTCCTGTCTGCGCTGAGGGCAAGTTCGGTGACTCACGTGTGCGAATGCGGCCGAGCAGACGAAGAGTCGGCGCTGAAGAGCGTTCTCGTCGTGGACATGCCGGGATTCGGCGACACTCGCTTCGACGCGACTCACGTTCACGCAGAGATCGCTAAATGCGTAGCGCTGACGGCTCCGGGTCCGCACGCCTTCCTGCTCGTCGTCCCGCTCGGCCGCTTCACGGCAGACGAAGATCGGGTCGTCGCACAAATGCTGCGGGTGTTCGGCGAGGCGGCGCTCCGCCACACGGTGGTGCTGTTCACGCGCGGAGACGAGCTGGAGGACGGCGGCGTCCAGGGTTTCTTCGAGTCAGCTCCGGAGCGACTGAAGGTGCTTCTGCGTGACTGCGGCGGGCGATACTGCGTCTTCAACAACCGAGCGCCAGAGAACCGCACGCAAGTCAACACGCTGCTAACGATGGTGGACGGCATGGGCGGAGCTTGTTACACCAACAGCGTGTTCCTGCGCGCCGATGACGTAATACGTGATGAACAGCGGCGCCTCGGTCGCAGCAGACGCCAGGCCCTACGATCCGCACTCGGTCGCGTCCGATCAGAAGTCGCGCTCTCTGGGAAGGTTCTGGAGCGCGTCAAAGCGCTAGTCGCGGCGGGAGCCACCGGGATGGCGGTGGGGGCCGTTTTTGGG
>XM_043234655.1
CTTCCGCTCAGCGCGAGACGGGTCTGATGAACGTCAACAAAAGCAGCTTAAGTCGAGGAGAGTGGTCTGGATCAGACAGCAGACTCATGTCTGGAAGATCTTCTTCAGATCCGTGGAgtggagaggaagaggaggaggaggagggagcgACAGAGCAGAGCTGAGACTCGTTCTGATTGGCCGCACGGGCTCGGGCAAGAGCGCCACAGGAAACACCATCCTCGGACGACGTCACTTCCTGTCTGCGCTGAGGGCAAGTTCGGTGACTCACGTGTGCGAATGCGGCCGAGCAGACGAAGAGTCGGCGCTGAAGAGCGTTCTCGTCGTGGACATGCCGGGATTCGGCGACACTCGCTTCGACGCGACTCACGTTCACGCAGAGATCGCTAAATGCGTAGCGCTGACGGCTCCGGGTCCGCACGCCTTCCTGCTCGTCGTCCCGCTCGGCCGCTTCACGGCAGACGAAGATCGGGTCGTCGCACAAATGCTGCGGGTGTTCGGCGAGGCGGCGCTCCGCCACACGGTGGTGCTGTTCACGCGCGGAGACGAGCTGGAGGACGGCGGCGTCCAGGGTTTCTTCGAGTCAGCTCCGGAGCGACTGAAGGTGCTTCTGCGTGACTGCGGCGGGCGATACTGCGTCTTCAACAACCGAGCGCCAGAGAACCGCACGCAAGTCAACACGCTGCTAACGATGGTGGACGGCATGGGCGGAGCTTGTTACACCAACAGCGTGTTCCTGCGCGCCGATGACGTAATACGTGATGAACAGCGGCGCCTCGGTCGCAGCAGACGCCAGGCCCTACGATCCGCACTCGGTCGCGTCCGATCAGAAGTCGCGCTCTCTGGGAAGGTTCTGGAGCGCGTCAAAGCGCTAGTCGCGGCGGGAGCCACCGGGATGGCGGTGGGGGCCGTTTTTGGGGCCGCAGCTCCCCTGGCGGCCGCGCGGAGCCTCGGCATGATGGCCGTGGATCGGGCGGCGGAAGCGTGA

Function

NR:

description
PREDICTED: GTPase IMAP family member 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26858 False 892 TUCP 0.63 2 8150770 8152825
TU26861 False 926 TUCP 0.62 2 8150770 8152825
XM_043234655.1 True 988 mRNA 0.64 2 8150743 8152894

Neighbor

gene id symbol gene type direction distance location
LOC122331730 NA coding upstream 172853 7974543 ~ 7977890 (+)
ptger1c ptger1c,LOC107757344,LOC107567231,LOC107672434,LOC107670435,LOC107711161,LOC107587998 coding upstream 342981 7801296 ~ 7807762 (+)
LOC122334406 LOC107587953 coding upstream 354090 7786116 ~ 7796653 (+)
chmp6a chmp6a,LOC107744992,LOC107599353,LOC107711234,LOC107672453,LOC108432238 coding upstream 495553 7649629 ~ 7655190 (+)
ttyh2l ttyh2l,LOC107744973,LOC107670532,LOC107599325,LOC107711233,LOC107672455,LOC107587999 coding upstream 501797 7619650 ~ 7648946 (+)
srebf2 LOC107574638,LOC107745393,LOC107721684,LOC107572757 coding downstream 2477 8155371 ~ 8166377 (+)
nol12 nol12,LOC107676179 coding downstream 25620 8178514 ~ 8181737 (+)
LOC122339678 NA coding downstream 31654 8184548 ~ 8189293 (+)
triobpb triobp,LOC107574640,LOC107721687,LOC107661081 coding downstream 36559 8189453 ~ 8200478 (+)
ndufa6 ndufa6 coding downstream 48705 8201599 ~ 8207081 (+)
G17990 NA non-coding upstream 5718 7984480 ~ 8145025 (+)
G17998 NA non-coding upstream 40974 8015637 ~ 8109769 (+)
G18016 NA non-coding upstream 47326 8103050 ~ 8103417 (+)
G17993 LOC107566823,LOC107739961,LOC107574374,LOC107576777,LOC107659785,LOC107565530,LOC107742984,LOC107710146,LOC107725412,LOC107717634,LOC107655767,LOC107571898 non-coding upstream 58501 7989126 ~ 8092242 (+)
G17976 LOC107744976,LOC107711219,LOC107599314 non-coding upstream 227114 7915862 ~ 7923629 (+)
G18010 NA non-coding downstream 62358 8215252 ~ 8217217 (+)
G18025 fam234b,LOC107576065 non-coding downstream 63630 8216524 ~ 8217031 (+)
LOC122331402 NA non-coding downstream 159495 8312389 ~ 8314490 (+)
G18055 NA non-coding downstream 321399 8474293 ~ 8490417 (+)
G18092 NA non-coding downstream 518767 8671661 ~ 8675886 (+)
G18008 LOC107572757,LOC107745393,LOC107676178,LOC107574638,LOC107690127 other upstream 90886 8056659 ~ 8059857 (+)
G17988 si:dkey-182i3.10,LOC107718276,LOC107690448,LOC107683827 other upstream 184549 7964749 ~ 7966194 (+)
LOC122341279 LOC107730542,LOC107679029,LOC107563335 other upstream 187767 7960071 ~ 7962976 (+)
G17985 ighv4-5 other upstream 199379 7950854 ~ 7951364 (+)
LOC122331768 LOC107710248 other upstream 200326 7949761 ~ 7950417 (+)
LOC122342110 wbp11,LOC107751605,LOC107678993 other downstream 107190 8260084 ~ 8563379 (+)
G18048 NA other downstream 360455 8513349 ~ 8742302 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other downstream 391397 8544291 ~ 8551151 (+)
LOC122341292 LOC107729471,LOC107687638 other downstream 827697 8980591 ~ 8988810 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other downstream 857156 9010050 ~ 9012178 (+)

Expression


Co-expression Network