G18129 (fam234b,LOC107714892,LOC107721680,LOC107576065)


Basic Information

Item Value
gene id G18129
gene name fam234b,LOC107714892,LOC107721680,LOC107576065
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8300414 ~ 8383611 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27070
GAATAGAAACACAAGAACAATGACAGAATATAGAGCTTTATTCAACCGTCTACATCAACTCTATCAGCCTCACCCACTGCCAGCTATCAGGGATGATTAATATATTATCAAAAGGAATTTACAGAAGAGTTcagcgtcacacacacacacaNNNNcacacacacacagacacacacacacagacacacacacacacagacacacacacacacagagacacacacacacacacagagacacacagacacacacacagagacacacacacagacacacacacacacacacagagacacacacacacacactcacacacacacacacacagagacacacacacactcatttgttttcattttgattcaaGTTTATAattctctctgtttttgttgttttctttaaattaattaatttcactttatttaggttttagcaattttgtcagtgttttaatttaatttagtttttattttcatctttttcattattagttatttatatttttgtacatttttgctgGTAAtaattgtagtttattttttattatgttttccatttaatatgttcattttagtaaaaacGTTGTTTTTGTAGCGAGTTGtaactcagtgtgtgtgtgtttgcagtcaTCCGGCGGCGGGTCACTTTAACGATGATGGTGTCCCTGATCTGCTCGTTCATCAGTCGGCCAATGGCGTGAGGAAGGTACAGGTTGTGGATGGCGCACGGGGGCGGAGCCTGTGGGAGGCGGAGTTTGTGTGTCCTCGTCTAGCGGTGGAGGATTCGTCGGTCCTGACAGCGTCCGACCAATCGGTGTTCCTCTTCTGGGCGGGAGATCCGCTGGCGCAGTCACAGAACGTCTCCAAGGCGCCGGAGCCGGTCCTCCGCAAGCTCTTCCTGCTTCACCCGCGCTATCCCACAATCCTCCTGGAGCTCAGCAGCACCACAGACACCGTCCTCAGCGCCGCCGGTGAGCcacacccacacactcacaccggCCAATCAGAGGCCGCCTCCCGTCACGAATACTTAATAAACTTCTCATGAGCCGTACTCTCACAAActattaatagttaaaaaaaacacttatttaccTGATTTCTGATTATACTGTTGg
>TU27072
GAATAGAAACACAAGAACAATGACAGAATATAGAGCTTTATTCAACCGTCTACATCAACTCTATCAGCCTCACCCACTGCCAGCTATCAGGGATGATTAATATATTATCAAAAGGAATTTACAGAAGAGTTcagcgtcacacacacacacaNNNNcacacacacacagacacacacacacagacacacacacacacagacacacacacacacagagacacacacacacacacagagacacacagacacacacacagagacacacacacagacacacacacacacacacagagacacacacacacacactcacacacacacacacacagagacacacacacactcatttgttttcattttgattcaaGTTTATAattctctctgtttttgttgttttctttaaattaattaatttcactttatttaggttttagcaattttgtcagtgttttaatttaatttagtttttattttcatctttttcattattagttatttatatttttgtacatttttgctgGTAAtaattgtagtttattttttattatgttttccatttaatatgttcattttagtaaaaacGTTGTTTTTGTAGCGAGTTGtaactcagtgtgtgtgtgtttgcagtcaTCCGGCGGCGGGTCACTTTAACGATGATGGTGTCCCTGATCTGCTCGTTCATCAGTCGGCCAATGGCGTGAGGAAGGTACAGGTTGTGGATGGCGCACGGGGGCGGAGCCTGTGGGAGGCGGAGTTTGTGTGTCCTCGTCTAGCGGTGGAGGATTCGTCGGTCCTGACAGCGTCCGACCAATCGGTGTTCCTCTTCTGGGCGGGAGATCCGCTGGCGCAGTCACAGAACGTCTCCAAGGCGCCGGAGCCGGTCCTCCGCAAGCTCTTCCTGCTTCACCCGCGCTATCCCACAATCCTCCTGGAGCTCAGCAGCACCACAGACACCGTCCTCAGCGCCGCCGGTGAGCcacacacacacacacacacacacacacacacaggattaAAAAGTGAGTAGGCAGAAATAGAAGTATTAATCAGACTAAGAGTAAAAGGTGATGGGATCGTCGTCCTTCAGTTGTTCTTCTTCTCTGGATTCTCAGGAGGGTAATACGGAGGAGGCTGGTCCTGAATCAACAACAAACAGCAGGAACTGATTCAAACTCAGGGATAAAGAAAACCAATCCTGAGCTGAAGTAGAG
>TU27074
GAATAGAAACACAAGAACAATGACAGAATATAGAGCTTTATTCAACCGTCTACATCAACTCTATCAGCCTCACCCACTGCCAGCTATCAGGGATGATTAATATATTATCAAAAGGAATTTACAGAAGAGTTcagcgtcacacacacacacacacacacacacacacacacacacaggattaAAAAGTGAGTAGGCAGAAATAGAAGTATTAATCAGACTAAGAGTAAAAGGTGATGGGATCGTCGTCCTTCAGTTGTTCTTCTTCTCTGGATTCTCAGGAGGGTAATACGGAGGAGGCTGGTCCTGAATCAACAACAAACAGCAGGAACTGATTCAAACTCAGGGATAAAGAAAACCAATCCTGAGCTGAAGTAGAG

Function

symbol description
fam234b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FAM234B (family with sequence similarity 234 member B).

NR:

description
PREDICTED: protein FAM234B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27070 False 1117 lncRNA 0.44 4 8333381 8383611
TU27072 True 1210 lncRNA 0.40 5 8300414 8383611
TU27074 False 377 lncRNA 0.41 2 8300414 8383611

Neighbor

gene id symbol gene type direction distance location
LOC122331822 NA coding downstream 43201 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 122419 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 179385 8109057 ~ 8121029 (-)
LOC122331782 NA coding downstream 208790 8084369 ~ 8091624 (-)
LOC122331758 NA coding downstream 332543 7966808 ~ 7967871 (-)
LOC122329328 hebp1,LOC107670539,LOC107661078 coding upstream 1453 8385064 ~ 8388690 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 115121 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 129802 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 147215 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 151500 8535111 ~ 8537581 (-)
G18147 NA non-coding downstream 89115 8158064 ~ 8211299 (-)
G18128 NA non-coding downstream 93081 8206878 ~ 8207333 (-)
G18146 triobp,stap2,triobpb,LOC107574640,LOC107721687,LOC107661081 non-coding downstream 102327 8194376 ~ 8198087 (-)
G18142 NA non-coding downstream 118685 8179263 ~ 8181729 (-)
G18165 NA non-coding downstream 144822 8048971 ~ 8155592 (-)
G18183 NA non-coding upstream 18019 8401630 ~ 8404572 (-)
LOC122333427 NA non-coding upstream 37591 8421202 ~ 8421632 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding upstream 99036 8482647 ~ 8679157 (-)
G18196 NA non-coding upstream 112305 8495916 ~ 8497007 (-)
G18225 NA non-coding upstream 191700 8575311 ~ 8575731 (-)
LOC122342198 NA other downstream 81359 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 82326 8054039 ~ 8218088 (-)
LOC122339740 NA other downstream 91321 8207698 ~ 8209093 (-)
LOC122334075 NA other downstream 128753 8058631 ~ 8171661 (-)
LOC122331739 NA other downstream 285713 8010976 ~ 8014701 (-)
zgc:113210 NA other upstream 609103 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 750432 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 1042961 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1610222 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 2010703 10394314 ~ 10396341 (-)

Expression


Co-expression Network