G18183


Basic Information

Item Value
gene id G18183
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8401630 ~ 8404572 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27162
aacacacacacacacacacacacacacacacacacagagagagacacacacacacacacacacacacacacacacacacacacagatcatctCTATGAGTAATAAGTTTCATTTTTCTTCACGACTTGGAGTTATACGaacaaaacatctttatttcagctttgtctttcagaaaaaaaagttgtcgGGGAGCAGAGACGCTATTCAGAAACCGTGATGCGTTCTGATGGTGTGCTGCTCCTCACACTGCTCTGGACCTTCACCGCTGTCTGTCAAGACTTCTATGATCAGGATTATTCTGACTATTGTAAGGGAATACTTTCTTCTCAGACTCTTGTGGTAGACGAAGTGCTTTGTGTTGGGAGTCAGTTTCCTTAAATGATGCTAATGCTGCAGAAGGGTTTTCTGTTGAATGACGGATGACGGTGTAAGCTGTGAAGATGTGACTGGATCTGTGGGAAAGAAGTCTCTCTCACCTGCAGCATCTCTCTGCCGGATCTCTTCCACTGctgcattatgttttttaaataccacGAGGTCTACGCAGGCTCAGTGATCTGTAAGGATTGGTTTCCTCAGCACTCCTGTGAGCAGAGAAGCAGCTTCACGTGTAGATACACCCCGACTAGAGCGACTTCTTTCTGCAAACGTCATGTGGAGCCAGAAGTTCACAATTCACTGTGAACATAGAAGAGCCCTCGCGGATGGGTGACGCTGAGACTCCCAGCAAGACAGGACCAGTTCTCGTTGAGATCATCGTCTTCACTGGTGTGAGCTGCCtcgtcttcatcatcttcatcatcatcgttATCGTAGGTTGTTTGAAGTGCTTCAAAAAGCGCTCTGGATTACGGAGGAGAAGTGACGGAGGTGCTCGAGAAGAACAAACAGTCATGACCACTAATCTTTAGGGCCGAACACGGCCGGGTGATGCAAGTTTACTGAAACTGATGAACTGTAAAACCAGCCAATGTTTGGCTATGTAAAGATGATCTGATAATTCAGTCCTCGTTTGGTCCACTACTTCAGTGTATTACTACCACTAGTCTTTACTGGACTACTTCAAAGTATTATGCAATAATCATTTTGAGTATCATATAACATCTTGTCATGCATGCCTTTTTAAGCTCATgtcataattgtatttattcacaaATTTTATATGGAATTATTAGTGTTATGAGAagtctaaatatgacctgaaatCTCTTTTTATGATGGTTTTCCGAAGATGAAAGTCTGTTCTGGACTGAAGGAGGTATTATGTGTCTAGAAAGAGCACTTACAATGACTTACAAAGATACACAGCAACAATGTGTGTATTCATTCTAtagaaaaatgactttttgttctcttgtttctcatttttgtcTTGATGATATCCCATAATTTGTTTATGGGGTTCAGGTCTTCTGGCCAGTCGAGCACACCAACaccatggtcatttaaccaacttGGGCAGGAGCCAAACCCTGCTGgaaaaattaaatcagcatcttcaaaaagctggTCATCAGAaagaagcatgaagtgctccacAATTTCTTGTTAAATgggtttcaaaaaacacaatggccTCATTCTTAGTGGTCTCAGATTCTTGAATTGGTTTTGCTCGACAATCCTCATAAGGCTGCGGTTCTCTTGCTTGGTTGAGCATCTGGTTTCTGGTTGAGTTTCCTTCTgctcaactttctgttaacatgcttggatacagcactctgtgaacagacGGCTTCTTTGACAATGAATGTTGTGAAGGGTGTCAATATGTCACGGGGTGGTTTAgcaggaaggagcactcgacgagattaaataaacttaaacagttttaatcttcttcAAATCTTcggacaaaataaaaacatacaagtAGGCAGCCagacaggcagaacataaaccacctCGACGATacaaacacaggacttaaatacacaaggaaatcactaaattaactagacacaggtgaggacaatgacacaattaacacgAACACCGAGCACAcgacacaagacaaaaacaacaacaaaggatccaaagacgtgacacaaGGATTGAGAAGAatagtgaaccaaactgagagacctTTGCAGGTGTTGCAGTGATTAGCTGAT

Function

GO:

id name namespace
GO:0022624 proteasome accessory complex cellular_component
GO:0008537 proteasome activator complex cellular_component
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU27162 True 2114 lncRNA 0.34 4 8401630 8404572

Neighbor

gene id symbol gene type direction distance location
LOC122329328 hebp1,LOC107670539,LOC107661078 coding downstream 12940 8385064 ~ 8388690 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding downstream 95637 8302071 ~ 8305993 (-)
LOC122331822 NA coding downstream 144417 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 223635 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 280601 8109057 ~ 8121029 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 94160 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 108841 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 126254 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 130539 8535111 ~ 8537581 (-)
LOC122330990 LOC107656950 coding upstream 307906 8712478 ~ 8714195 (-)
G18155 NA non-coding downstream 11999 8306724 ~ 8389631 (-)
G18129 fam234b,LOC107714892,LOC107721680,LOC107576065 non-coding downstream 18019 8300414 ~ 8383611 (-)
LOC122331391 NA non-coding downstream 84541 8314102 ~ 8317089 (-)
G18147 NA non-coding downstream 190331 8158064 ~ 8211299 (-)
G18128 NA non-coding downstream 194297 8206878 ~ 8207333 (-)
LOC122333427 NA non-coding upstream 16630 8421202 ~ 8421632 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding upstream 78075 8482647 ~ 8679157 (-)
G18196 NA non-coding upstream 91344 8495916 ~ 8497007 (-)
G18225 NA non-coding upstream 170739 8575311 ~ 8575731 (-)
G18228 NA non-coding upstream 212553 8617125 ~ 8617674 (-)
fmc1 NA other downstream 2802 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 182575 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 183542 8054039 ~ 8218088 (-)
LOC122339740 NA other downstream 192537 8207698 ~ 8209093 (-)
LOC122334075 NA other downstream 229969 8058631 ~ 8171661 (-)
zgc:113210 NA other upstream 588142 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 729471 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 1022000 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1589261 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 1989742 10394314 ~ 10396341 (-)

Expression


Co-expression Network