G18196


Basic Information

Item Value
gene id G18196
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8495916 ~ 8497007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27189
cacacacacacacactcagtacTCACTAAAAGGCCCATGAGTATCCGTAACTGTGAGGTTTGAAGTCCTCAGGGCCCAGAGAGATGGTCACCTGAAACACCTGCATATACATCATGTGAGCGACCATCCCAACCAGCCCTGAGACAAAACACAGtttgtatccagactagatggtggatcagcacccagagattatgttcatcagagaccagaaaacctagatgcgcc

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27189 True 228 lncRNA 0.49 2 8495916 8497007

Neighbor

gene id symbol gene type direction distance location
LOC122329328 hebp1,LOC107670539,LOC107661078 coding downstream 107226 8385064 ~ 8388690 (-)
LOC122341283 hebp1,LOC107670539,LOC107661078 coding downstream 189923 8302071 ~ 8305993 (-)
LOC122331822 NA coding downstream 238703 8234899 ~ 8257213 (-)
LOC122334091 NA coding downstream 317921 8174036 ~ 8177995 (-)
irgf4 NA coding downstream 374887 8109057 ~ 8121029 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding upstream 1725 8498732 ~ 8502673 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding upstream 16406 8513413 ~ 8524779 (-)
LOC122341497 NA coding upstream 33819 8530826 ~ 8535042 (-)
pde6hb LOC107724721 coding upstream 38104 8535111 ~ 8537581 (-)
LOC122330990 LOC107656950 coding upstream 215471 8712478 ~ 8714195 (-)
LOC122333427 NA non-coding downstream 74284 8421202 ~ 8421632 (-)
G18183 NA non-coding downstream 91344 8401630 ~ 8404572 (-)
G18155 NA non-coding downstream 106285 8306724 ~ 8389631 (-)
G18129 fam234b,LOC107714892,LOC107721680,LOC107576065 non-coding downstream 112305 8300414 ~ 8383611 (-)
G18225 NA non-coding upstream 78304 8575311 ~ 8575731 (-)
G18228 NA non-coding upstream 120118 8617125 ~ 8617674 (-)
LOC122341612 NA non-coding upstream 270448 8767455 ~ 8773405 (-)
G18273 NA non-coding upstream 505130 9002137 ~ 9002412 (-)
LOC122342131 NA non-coding upstream 510606 9007613 ~ 9007999 (-)
fmc1 NA other downstream 97088 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 276861 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 277828 8054039 ~ 8218088 (-)
zgc:113210 NA other upstream 495707 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 637036 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 929565 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1496826 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 1897307 10394314 ~ 10396341 (-)

Expression


Co-expression Network