G18228


Basic Information

Item Value
gene id G18228
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8617125 ~ 8617674 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27228
cacacacacacacacacacacacacacacacactcacacacacacacacacacacacacactcacacacacacactcaccgaGCGGCGCACACGTCCTCCGGCGGCTCCGGCGTCCCGTTCACATTCACCTCCGCTGAACCGGCTTCACTCCGCATTTAGTCCAATTGTAAAAGAGCAGAAAGAGGCGCGTGTGTTTGCTCATCTGGAAAGGCGTCGCAGTCCAGTCTCATGAATGAAGCGAGATAGTCTCCTCAGGAGAAACAGAAGAGAAGAGCTGCATCCAAACGATCATCAGCGCGATTCCTCTCAGACACAGATATCGACAGGACCGCGCGCGGAGAGACGCGCTGAGGATGACGGAGAGGcgcgcacacacacacacacacactgtgtgtgtgctctgatGAGACTGTCTATTAATGAACAGATTAattactctcacacacacgagCGCTGGTGCGAGAATAATATCAGAAAGAGCGACAGACCGATGAATGAACGACAGAGAAAGATGAGCAGAAAGAAC

Function

NR:

description
PREDICTED: spectrin beta chain, non-erythrocytic 1-like isoform X1

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0098655 cation transmembrane transport biological_process
GO:0098660 inorganic ion transmembrane transport biological_process
GO:0098662 inorganic cation transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27228 True 527 lncRNA 0.52 2 8617125 8617674

Neighbor

gene id symbol gene type direction distance location
pde6hb LOC107724721 coding downstream 79544 8535111 ~ 8537581 (-)
LOC122341497 NA coding downstream 82083 8530826 ~ 8535042 (-)
zgc:65811 LOC107656948,LOC107698068,LOC107751600,LOC107575948,LOC107569882,LOC107732520,LOC107732523 coding downstream 92346 8513413 ~ 8524779 (-)
LOC122331080 emp1,LOC107573034,LOC107698066,LOC107732522,LOC107678994 coding downstream 114452 8498732 ~ 8502673 (-)
LOC122329328 hebp1,LOC107670539,LOC107661078 coding downstream 228435 8385064 ~ 8388690 (-)
LOC122330990 LOC107656950 coding upstream 94804 8712478 ~ 8714195 (-)
LOC122341290 LOC107725336,LOC107573036,LOC107698059,LOC107758357,LOC108425688,LOC107661082,LOC107676879 coding upstream 188014 8805688 ~ 8829491 (-)
LOC122332528 LOC107581739,LOC107738031,LOC107674723,LOC107591458,LOC107720084,LOC107654532 coding upstream 371450 8989124 ~ 8991919 (-)
LOC122329549 chchd5,LOC107711181,LOC107757370,LOC107672451,LOC107670463 coding upstream 447327 9065001 ~ 9066803 (-)
lpar2a lpar2a,LOC107711250,LOC107672473,LOC107587950,LOC107672513,LOC107757366,LOC107670534 coding upstream 512138 9129812 ~ 9132805 (-)
G18225 NA non-coding downstream 41394 8575311 ~ 8575731 (-)
G18196 NA non-coding downstream 120118 8495916 ~ 8497007 (-)
LOC122333427 NA non-coding downstream 195493 8421202 ~ 8421632 (-)
G18183 NA non-coding downstream 212553 8401630 ~ 8404572 (-)
G18155 NA non-coding downstream 227494 8306724 ~ 8389631 (-)
LOC122341612 NA non-coding upstream 149781 8767455 ~ 8773405 (-)
G18273 NA non-coding upstream 384463 9002137 ~ 9002412 (-)
LOC122342131 NA non-coding upstream 389939 9007613 ~ 9007999 (-)
G18326 NA non-coding upstream 404246 9021920 ~ 9022306 (-)
G18320 NA non-coding upstream 507282 9124956 ~ 9127729 (-)
fmc1 NA other downstream 218297 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 398070 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 399037 8054039 ~ 8218088 (-)
zgc:113210 NA other upstream 375040 8992714 ~ 9007443 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 516369 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 808898 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 1376159 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 1776640 10394314 ~ 10396341 (-)

Expression


Co-expression Network