zgc:113210


Basic Information

Item Value
gene id zgc:113210
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 8992714 ~ 9007443 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27302
GGTCGACCGAAGGCTGTGTGTTCGTACCTCACAAAGGATAACGTCGGTGCCCTTGACTAACTTGTGCGACTGTTGCTGACACCGAACGGCAGCCCACCATCGATAACGTCTTTGGTAAGGAATGGTGCATGAATCTCTGGAGACACGAGGAGTCAAATGCTGGTCAGAAGGACGACACGCAATTAGACTCTTCAGTCAGCGCAGAAGAGGCAATAAATTTGCTGGATGAAGAACCAGATGTGATTATGATAAATGAGGAGATGCTGAAGAATGGCAATTGCG
>XM_043234663.1
ATGACAAGCGCTTCGTTGCTCCTACTGTTCGAAGAGGTTCAGGTGTTTCCAGTCAACTCACGATACATCAGCGGAGTCACACAGGCGATGAAGCCGTGCGGTGCGCTCTGCGGAAAGGTGTTTTACGGTAATTCATCCCATGATTCCTTTCAGCCAAACGCTATTTATGGTTTCTACAGAAAGATTGTACCGAATATAGGGACAGCGACTGGCCAAAAAACGGCTATATTAAGAGCACACCGGAGCCTGCGTTTTCTCCAGACATCGCAAGGCTTCCCGCGAGCGACGGACATCATGAACACGGCTGATTTTCAGACGCAGCTGACGTCCATAATGGAAATTATGGCGAGGACCGCTGTCGCTGAAATAAGCAAACTTTTCGAGAGAAATTCTTTGCTGCTGCGGTTAGAGATTTCGCGGCGTTCGAGCGAAAACGAATCCCTGAGAAAGAAATGCCATTTCCTGGAGAAGGAACTTCAGTTCGCGCGGAAAACCGCCGGGAAGGTGAACGGGATAGAAGCTCCGTTCAGCCATCCGGGACTTACAGACACCGAACGGCAGCCCACCATCGATAACGTCTTTGGTAAGGAATGGTGCATGAATCTCTGGAGACACGAGGAGTCAAATGCTGGTCAGAAGGACGACACGCAATTAGACTCTTCAGTCAGCGCAGAAGAGGCAATAAATTTGCTGGATGAAGAACCAGATGTGATTATGATAAATGAGGAGATGCTGAAGAATGGCAATTGCGCTGGGAAAAATAAACACGAGGAAGGACCTGCAGCGACCGGTGATGAGAGATGTGTCGCCCAGAGCTCTGAAGATTTTATCACGTGCACGGTACCTTCAGATGAGCCAGACGATCGAATGTACACCAGACAGCAGCTGAAGAGCAAGCTCGATGGAGCTCCACACGGAGACATCGCGCAGCAGGATGCTGGCCATCGTCCCGCAATCGACAACGTCTTCGGCAAGGGAATGGTGCATGAACCTCTGGAGACACGAGGAGGCACATGTTGGAGAGCAGGAGGACACGCATCTGGGCTCTCCAGTCATCATAGGAGAGAGGAACCCGACATGATCATGATCAAGGAGGAGGCATTTGAAGATTGCTCTTCTGGGATAAACGAGGAAGACCAAGATAATCAGAGTGTGCAAGTCCTTATTTCCAGAGGAAATCAAAAAATCCTCCCAGAGTTGGACCTAAACAAGCTTCAGAATGTGGTCAGTCATCTTTTCGTTAGTGGTGGGTGTGGAGAATAGCGGAGGACCTTTCCCTAGTAAGTGTCCGATCTTCAAGACTTTCTGGAGCCAATACAGTGTTCGAAAACttgtaaaacattcaaacaaagAGAATCCAATGGTCAAGCGGATGGAACATCTAACGAGATGACGTTCACTCCTTTATCATCAAAGCGAGTCCCTTCAGAACAGTCCTTTATTCCCTCATTCATCAAATCCAGCTGGGTCAGAAGTTAGGTTCCTGGAACACGCGTGCCAGCGGCTCTCGCTCAGGCCACGTCCACTGGAGAAAGCTCGACCAGGACCGAGAAGGAGTTTGTTAGGCTCGTGGTGGCAGCCATGCAAGCCACTGTCGGACCAAACTTAGCCGCTTGTGGGGAAGTGGCACGAAATATCGTGTCTGCATATCCCCTGACCTTCGGAGACATTTCTGAGGAAGGAGAACAGCTGGGAAACGGCTTCAGTTGCTTACAAAGACAGCTAAAAACTAGGGTGGAACATGTGAATAGAGATGTTATGGAGCACAGGATTAGATGGGCCTGAAGACCATCATCCGAAAAGACCTGGACAACAGGACAACTACATAAGGACAAAGAAATGCGATGTAAAGTGGACAGTTACGGATGCATCAATTGGCAGCCGTCTTCCATCCCAGAAGGTGAGGCGGCAGAATCTCTTGAAATGAAGAGGAAGGTTGCGGCTGATTTTCAGTCTGCAGGACCAAAAGCTGCCGAAAGTTGCCCAGCGTAGATGACTTAATGCAGCAGGCATTATGTTTACCAGCGCCACATGATCAACTCATCCCCTCCTACCATCAGTGAGATTGAGGGGCACTGCGTTCCTGTTCACGAAAGAGGCCTCTGCAGGCACTTCAAAATCCTGACTGGGATTGACATCAGAAACCGCTTTATGAAACTCTTCTGCGTTAAATAGAGAATACTGAACTATTTCGGCAGACAGAGACTGAAGTGGAGCGGAGAGATCCAGAGCATGCGCGAGATCGGCGACGCCAATGCAACCGACAATAACAGGATAGCCATGTCAGCCATCCTGTTGATGATGAAATACTTTAAGGAAAAGGACAACGCTGTATTCATCTTAGCAGATGAAAACTCTACTAAGGCGTCCATCGAAAATGAAATCAGCTTACCCGCGGCCTTGCCTCTCATCATGCTTTCGtcattttcatatatttcagGTGAGACGTTGCTGACTTCTTCAAAGTGGTTTGTCAGTATTGAAGGCAGAGTAACACATTCTATAGACGACCAGCTGGACTTTGCAGCAGCATTGTCTGTGTTCTTTGGGTGCTTCTATGCTTTTAATATCGAGTATGAGGAGTCAGCCAGTGCCACCCTGGAGCTTATTCAGAAGTTCTTCGTGAGGATTAATCCGAGGGCACTAAATGTACCTCAAATCAGGCACAAGAAGTCGAAGGGCGGAGTTCGACTGTTCAAAGAAACCCAAAACTTAATACCCACGACCTTCAGCGACACGGTGATGAAGATCACGTCGCCTCTGAAAGATTTTATGCGTACCGCGGTACTTCCAGATGACCCAGTCAGTCCAGCGTGCAGCAGAGCGCCAGCTGAAGAACAGAGAAGCTCTCGATGGAGCGATCTCTACGCGCGGAGAAAGCACAGCAGAGCAAGCGTTCCTCAGCCCAGCCCACACACAGCACGCAGAGTACTCAAAGAGGAAAAGCGCCTCATTCGAGGAGAGGCGTACCGTTGCATGGAGTGTGAAGGCTTTGCTCAGAAGAGCTCTCTAACGTACACCTCCTGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0006935 chemotaxis biological_process
GO:0000904 cell morphogenesis involved in differentiation biological_process
GO:0048812 neuron projection morphogenesis biological_process
GO:0120039 plasma membrane bounded cell projection morphogenesis biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048858 cell projection morphogenesis biological_process
GO:0032990 cell part morphogenesis biological_process
GO:0097485 neuron projection guidance biological_process
GO:0061564 axon development biological_process
GO:0048667 cell morphogenesis involved in neuron differentiation biological_process
GO:0007409 axonogenesis biological_process
GO:0007411 axon guidance biological_process
GO:0042330 taxis biological_process
GO:0031175 neuron projection development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27302 False 282 lncRNA 0.49 3 9004854 9006004
XM_043234663.1 True 3027 mRNA 0.49 23 8992714 9007443

Neighbor

gene id symbol gene type direction distance location
LOC122332528 LOC107581739,LOC107738031,LOC107674723,LOC107591458,LOC107720084,LOC107654532 coding downstream 795 8989124 ~ 8991919 (-)
LOC122341290 LOC107725336,LOC107573036,LOC107698059,LOC107758357,LOC108425688,LOC107661082,LOC107676879 coding downstream 163223 8805688 ~ 8829491 (-)
LOC122330990 LOC107656950 coding downstream 278519 8712478 ~ 8714195 (-)
pde6hb LOC107724721 coding downstream 455133 8535111 ~ 8537581 (-)
LOC122341497 NA coding downstream 457672 8530826 ~ 8535042 (-)
LOC122329549 chchd5,LOC107711181,LOC107757370,LOC107672451,LOC107670463 coding upstream 57558 9065001 ~ 9066803 (-)
lpar2a lpar2a,LOC107711250,LOC107672473,LOC107587950,LOC107672513,LOC107757366,LOC107670534 coding upstream 122369 9129812 ~ 9132805 (-)
nr5a5 nr5a5,LOC107711258,LOC107672469,LOC107587942,LOC107757363,LOC107670482,LOC107563324 coding upstream 238933 9246376 ~ 9251223 (-)
soul5 LOC107672470,LOC107587943,LOC107757348,LOC107563322 coding upstream 244868 9252311 ~ 9254408 (-)
shfl zgc:171711,LOC107757360,LOC107563321,LOC107670471 coding upstream 247998 9255441 ~ 9260491 (-)
LOC122341612 NA non-coding downstream 219309 8767455 ~ 8773405 (-)
G18193 LOC107573033,LOC107758359,LOC107732521,LOC107569877 non-coding downstream 313557 8482647 ~ 8679157 (-)
G18228 NA non-coding downstream 375040 8617125 ~ 8617674 (-)
G18225 NA non-coding downstream 416983 8575311 ~ 8575731 (-)
G18196 NA non-coding downstream 495707 8495916 ~ 8497007 (-)
LOC122342131 NA non-coding upstream 170 9007613 ~ 9007999 (-)
G18326 NA non-coding upstream 14477 9021920 ~ 9022306 (-)
G18320 NA non-coding upstream 117513 9124956 ~ 9127729 (-)
G18357 NA non-coding upstream 126171 9133614 ~ 9133813 (-)
G18378 NA non-coding upstream 175096 9182539 ~ 9183271 (-)
fmc1 NA other downstream 593886 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 773659 8218902 ~ 8219055 (-)
fam234b srebf2,fam234b,LOC107690127,LOC107676178,LOC107572757,LOC107745393,LOC107576065,LOC107574637,LOC107721680,LOC107714892 other downstream 774626 8054039 ~ 8218088 (-)
LOC122339740 NA other downstream 783621 8207698 ~ 8209093 (-)
LOC122334075 NA other downstream 821053 8058631 ~ 8171661 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other upstream 126600 9134043 ~ 9138089 (-)
G18433 LOC107670519,LOC107563315 other upstream 419129 9426572 ~ 9462905 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 986390 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 1386871 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 2004493 11011936 ~ 11064598 (-)

Expression


Co-expression Network