G18443


Basic Information

Item Value
gene id G18443
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9541700 ~ 9543366 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27551
TTCCTTCTGCAGCTCCTTGCTGATGTCATCGATCTTCTGCTGCAAGCGTTTTCTGCGCTGCTCAGGAGGAAGATGGGTGAAGCCCTCTGTGTCCACAGACTGAGGAGATGGGCAGGGAGATGGCGTCACtcacaaaaatgtacacaaactaACAAACAGCCTCCCCTCCAACACCACAAGCCAAGCAGTGACAGACGTGAACCAGACTGTGACCACAGTGAAAGTTCAGGTTTGCAGAATGAAAAGTTGTACTGTAGCAATTCACCACCAGGGAAATCAAACCGCATGTTATAACTGTTGCACTTAAACAATACAGACTGAGTGCTTTAACAAGATTTGGCAACACGTTTATGACAAGTAAATCAAGAAGAAATGCTTAAATAAGTGAAAAAGTTAAGTTTACTCAAAGGAATGGTCTGGGTTAAATAAAATTGCACTTTTTGAATACAATCTGTGGCATGTTGTCGACATGTTGCagacagtcatttttttttattaatattttgatgtaaagctaaaatatgttacatggaatattcaataaaatgtttcatatttgctCAAGTCAAAAAACCCATGCTTTCAGATTCAGACTACTTTTCTAGACAGtctgaccaatcataacgcTGAACTTGTCATTTTTGTCTGAGTAGACTAGCGATTGTGGACAAACTAAAGTTTGTACTGATGTCTTTCTGCGGTTGAAACAAGATACCTTCTgatgttcatgtttattttgtggtataacaagcaaatataaaaaaatgtttcATATTTGAGCATTTACTCACACGGAGCTGCAGACTTGCCCCATAGACATCCACTGTACGGGTATTGccattttctgttgtttttacaaacCCGAGATAAATGAGGTCAGTAGACTTAAAGGTCCATTTAACCCGGAATATTCCTTTGAGTAACCCTCAATTAATTTA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU27551 True 938 lncRNA 0.44 2 9541700 9543366

Neighbor

gene id symbol gene type direction distance location
olfm2a olfm2a,olfm2,LOC107563315,LOC107670519 coding upstream 54512 9428864 ~ 9487188 (+)
col5a3a col5a3a,LOC107672483,LOC107711265,LOC107563316,LOC107757338,LOC107670510,LOC107587984 coding upstream 140890 9353698 ~ 9400810 (+)
zmp:0000001048 zmp:0000001048,LOC107711259,LOC107670472,LOC107563320 coding upstream 273970 9260905 ~ 9267730 (+)
camsap3 LOC107711256,LOC107672468,LOC107587945,LOC107670479,LOC107757361 coding upstream 296043 9214244 ~ 9245657 (+)
xab2 xab2,LOC107672506,LOC107670481 coding upstream 328766 9206654 ~ 9212934 (+)
ppan ppan,LOC107672501,LOC107711268,LOC107670430,LOC107754053 coding downstream 34359 9577725 ~ 9582385 (+)
p2ry11 p2ry11,LOC107711269,LOC107672502,LOC107670465,LOC107754043 coding downstream 39008 9582374 ~ 9586218 (+)
eif3g eif3g,LOC107672439,LOC107711270,LOC107754044,LOC107670490 coding downstream 44644 9588010 ~ 9591291 (+)
icam3 NA coding downstream 113186 9656552 ~ 9666605 (+)
LOC122341977 NA coding downstream 124201 9667567 ~ 9672804 (+)
G18429 NA non-coding upstream 56964 9484435 ~ 9484736 (+)
G18425 LOC105357980 non-coding upstream 127693 9413644 ~ 9414007 (+)
G18305 NA non-coding upstream 279461 9261970 ~ 9262239 (+)
G18303 NA non-coding upstream 291070 9250099 ~ 9250630 (+)
G18261 hs3st2,LOC107550309,LOC107703334,LOC107741797,LOC107574133,LOC107674621 non-coding upstream 659578 8881198 ~ 8882122 (+)
G18453 NA non-coding downstream 26672 9570038 ~ 9570283 (+)
G18454 LOC107711167 non-coding downstream 27788 9571154 ~ 9571734 (+)
G18456 LOC107672431,LOC107587937 non-coding downstream 29818 9573184 ~ 9574262 (+)
G18457 NA non-coding downstream 30923 9574289 ~ 9574489 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding downstream 31515 9574881 ~ 9575902 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 356040 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 358410 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 529522 9010050 ~ 9012178 (+)
LOC122341292 LOC107729471,LOC107687638 other upstream 552890 8980591 ~ 8988810 (+)
LOC122331854 mgp,LOC107574611,LOC107569876 other upstream 990549 8544291 ~ 8551151 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other downstream 149583 9692949 ~ 9697915 (+)
G18491 NA other downstream 196430 9739796 ~ 9749880 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 255449 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 482452 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 1148524 10691890 ~ 10698540 (+)

Expression


Co-expression Network