G18502 (ba1,ba2)


Basic Information

Item Value
gene id G18502
gene name ba1,ba2
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9775320 ~ 9784458 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27622
CCCCTTCATCTTAAACTTGGACGTGAGAGAATTtaaaaaaccctaaaataaaatacagatgaaTGTGGTTAACAACTGCGGACaaagctttatattttaaataattcttcttcttttttttttttttttttttttttttttttgcttttaacaatattttattgatcTTATTTTATAAGAAATAGATCTTTGTGAACAGCTCCCGCAGTCTTCTGCAACGCCGCTGGGGTTCATCGGCGATGAGGATCTAGTGGTACTGTCTGCACAGGGCGGAAACGACGACAGACAGAAACTTCTGCCAGGCCTCCTGGATGTCGGCGTTGAAGCCAGCGGGGCCGAACTTCATGGCGGCGCACACGGTGATGCAGTCAGCCAGAAGCTCTGAAGTTGTCGGGATCCACGTGCAATCTCTCGGAGTGCATCACGCTCAGCGCTGAGTAGGTGGCCTTGATGTTATCCATGTTCTTGATGGCTCTCTCCAGGCCTCCCATCACAGTCCTCCCGTGAGCTGCGACCTTGGGGTTGCCCATGATGGCAGCGGGGCTTGACAGGTTTCCGAAGGTGGCGAAATATCTCTGAGTCCAGGGATACACGATCAGACACCTGCCAGGGCCTGAGGTCCGAGTTCATCGATATTGAGCTTTCCCCACAGGGTAGCGATGGCGCTTCGCTCAGCATCTGTCCACTCAACCATGTCTACGTTTTGAGGGTGTTCTTAGGTACTTGCTTAAGTCCAGTAGGAAACACTAGTAGAAATTCAGAAACCGGAGGGCAATTTATTGATGTGCGATGTCTCCTC

Function

NR:

description
Ba1 globin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27622 True 799 lncRNA 0.45 4 9775320 9784458

Neighbor

gene id symbol gene type direction distance location
mpg si:xx-by187g17.9,LOC107596818,LOC107754030,LOC107670500,LOC107672429,LOC107587979,LOC107711169 coding upstream 14136 9755181 ~ 9761184 (+)
mgrn1b mgrn1,mgrn1b,LOC107754037,LOC107672503,LOC107711275,LOC107670506 coding upstream 82683 9679898 ~ 9692637 (+)
LOC122341977 NA coding upstream 102516 9667567 ~ 9672804 (+)
icam3 NA coding upstream 108715 9656552 ~ 9666605 (+)
eif3g eif3g,LOC107672439,LOC107711270,LOC107754044,LOC107670490 coding upstream 184029 9588010 ~ 9591291 (+)
LOC122341659 si:ch211-5k11.8,hbaa1,LOC107587926 coding downstream 824 9785282 ~ 9786123 (+)
hbbe1.1 LOC107587921,LOC107596825,LOC107674643,LOC107703325 coding downstream 4897 9789355 ~ 9790164 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding downstream 8198 9792656 ~ 9793389 (+)
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding downstream 11331 9795789 ~ 9796532 (+)
LOC122332778 NA coding downstream 19115 9803573 ~ 9804386 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 172256 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 199418 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 200831 9574289 ~ 9574489 (+)
G18456 LOC107672431,LOC107587937 non-coding upstream 201058 9573184 ~ 9574262 (+)
G18454 LOC107711167 non-coding upstream 203586 9571154 ~ 9571734 (+)
G18507 NA non-coding downstream 70145 9854603 ~ 9859173 (+)
G18517 NA non-coding downstream 81328 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding downstream 126499 9910957 ~ 9911612 (+)
G18671 NA non-coding downstream 489516 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 787361 10571819 ~ 10579144 (+)
G18491 NA other upstream 25440 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 77405 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 589660 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 592030 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 763142 9010050 ~ 9012178 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other downstream 14357 9798815 ~ 9799796 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 241360 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 907432 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 968301 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1549283 11333741 ~ 11335825 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G332152 NA non-coding CI01000113 null 256824 ~ 327004 (-)