hbbe1.3 (LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921)


Basic Information

Item Value
gene id hbbe1.3
gene name LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9798815 ~ 9799796 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27625
tATAGGCTACGTTCTTTCCTCTCCATTTTATCTTCAATTAGTCAAATCCTATCCACACATTTCACTCATTggcacattttttcttaaattaagcgaaataccatttaaattaactttattacAACATAAAAGTGGGCTATGATATGCATCTCTCGGGTGGAGATGGCTGAACCAACCCACAAACTTATCACCCAATAGGCTGTCGAGGGGTGGGGCGATGAAACGCGTTTAAAAGTACAGCTCTGAAACTCTCTCTCCACAGCACTCTTTAGCATCCGTTCAAGGCACTCAGTCTGAACATCTAAAGTCGGAAACATGGTTGAGTGGACAGACTTTGAGAGGACCACCATCCAGGACATCTTCTCCAAGATGAACTACGAAGTCGTTGGTCAGCAGGCTCTGGCAAGATGTCTCATCGTTTACCCCTGGACCCAGAGGTACTTTGGCAAGTTCGGTAACCTGTACAACGCCTCTGCCATCATGGGAAACCCCATGGTTGCTGCTCACGGAGCAGTCGTGCTCCACGGCCTGGACAAAGCTGTGAAGAACATGGACAACATCAAAGCCGCCTATGCTGAACTGAGCGTGCTGCACTCCGAGAAGCTCCACGTAGATCCTGACAACTTCAGGCTTTTGGGTGACTGCCTGACCATCGTTGTTGCTGGACAGCTGGGCTCTGGATTCACCCCTGAGGTCCAGGCCGCTTTCCAGAAATTCCTCGCCGTCGTGGTCTCATCTCTTCGAAGACA
>XM_043229722.1
ACTCTCTCTCCACAGCACTCTTTAGCATCCGTTCAAGGCACTCAGTCTGAACATCTAAAGTCGGAAACATGGTTGAGTGGACAGACTTTGAGAGGACCACCATCCAGGACATCTTCTCCAAGATGAACTACGAAGTCGTTGGTCAGCAGGCTCTGGCAAGATGTCTCATCGTTTACCCCTGGACCCAGAGGTACTTTGGCAAGTTCGGTAACCTGTACAACGCCTCTGCCATCATGGGAAACCCCATGGTTGCTGCTCACGGAGCAGTCGTGCTCCACGGCCTGGACAAAGCTGTGAAGAACATGGACAACATCAAAGCCGCCTATGCTGAACTGAGCGTGCTGCACTCCGAGAAGCTCCACGTAGATCCTGACAACTTCAGGCTTTTGGGTGACTGCCTGACCATCGTTGTTGCTGGACAGCTGGGCTCTGGATTCACCCCTGAGGTCCAGGCCGCTTTCCAGAAATTCCTCGCCGTCGTGGTCTCATCTCTTCGAAGACAGTACCACTAGAAACAAAACCCGTTTTAACTGCTACACAGAG

Function

NR:

description
PREDICTED: hemoglobin subunit beta-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27625 True 749 TUCP 0.39 3 9798815 9799755
XM_043229722.1 False 543 mRNA 0.52 3 9799062 9799796

Neighbor

gene id symbol gene type direction distance location
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding upstream 2283 9795789 ~ 9796532 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding upstream 5426 9792656 ~ 9793389 (+)
hbbe1.1 LOC107587921,LOC107596825,LOC107674643,LOC107703325 coding upstream 8651 9789355 ~ 9790164 (+)
LOC122341659 si:ch211-5k11.8,hbaa1,LOC107587926 coding upstream 12692 9785282 ~ 9786123 (+)
hbaa2 si:ch211-5k11.6,hbz,LOC107587927,LOC107672462,LOC107670501 coding upstream 19525 9778492 ~ 9779290 (+)
LOC122332778 NA coding downstream 3777 9803573 ~ 9804386 (+)
angptl8 NA coding downstream 60667 9860463 ~ 9863218 (+)
elavl3 elavl3,LOC107754020,LOC107674672,LOC107703356,LOC106607222,LOC102780136 coding downstream 92737 9892533 ~ 9908575 (+)
nat15 nat15,naa60,LOC107690248,LOC107568044,LOC107685925,LOC107738623 coding downstream 120779 9920575 ~ 9927011 (+)
carhsp1 carhsp1,LOC107576530,LOC107733846,LOC107690249,LOC107590589,LOC107738622 coding downstream 127316 9927112 ~ 9941228 (+)
G18502 ba1,ba2 non-coding upstream 14357 9775320 ~ 9784458 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 195751 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 222913 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 224326 9574289 ~ 9574489 (+)
G18456 LOC107672431,LOC107587937 non-coding upstream 224553 9573184 ~ 9574262 (+)
G18507 NA non-coding downstream 54807 9854603 ~ 9859173 (+)
G18517 NA non-coding downstream 65990 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding downstream 111161 9910957 ~ 9911612 (+)
G18671 NA non-coding downstream 474178 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 772023 10571819 ~ 10579144 (+)
G18491 NA other upstream 48935 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 100900 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 613155 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 615525 9138467 ~ 9183290 (+)
pgls pgls,LOC107672478,LOC107711179,LOC107757376,LOC107567243,LOC107670497 other upstream 786637 9010050 ~ 9012178 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 226022 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 892094 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 952963 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1533945 11333741 ~ 11335825 (+)
G18949 NA other downstream 1569097 11368893 ~ 11369752 (+)

Expression


Co-expression Network