G18507


Basic Information

Item Value
gene id G18507
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9854603 ~ 9859173 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27627
CAGCAGGGGGAGACACAGGCTCTGTTGTGGGCAGGTGGAAGCAGTAGTGGATATAAGAGGACAGCAGATTATTTCGGCCATGATGGTCCTGGTTTCCCTCTAAGTTCTTATGGATCTGGTTTACCAGCAGGGCCATGGCTTCAAAAGCAGCACGGCCAAGATTGACTGGATTTAGAGGACGGAGAGAAAACGGATTACACAAGGAAGCGGCAAAAGATTAGGGCGCAACAAATAATATTAGAGAGCAAATCCAGTGTTGCTAACCGATCTGTCCTGCTATGACAGGAGGGTGTACGATTAGCAATATGAGCTTGCTCATCAGTTGATGCAGGAAGCGCACGCAAGTGTCCAGCAGCGCCCCTTTCAGAGCTGCCATGCTGGCCTTCAGCTCCGCCTCCACATTTGCTTCAGTGATTATAACATCCTTCAGCCGGAAAGGGAAGGAGTACTCCTCCAGAACATACACAAGTGTGAAGAACTTATCCAGggtttattttttcattaccTGTGTGTGAACTGAGGAGGCCGCCTTCACCTCTACATTGAAGACTCCTTTGTGGTTGTCCACCCATTTCATCCCCGGCTTTGACAGTGTGACTAGAGCCGGGTGTGATGGGTGACTCACAGACATGGCCTGGCTGGGATCCTCTCCTGCCATGAACTGCACCTTCACCGCGATGTTCCTCACCGAACCCTGCCGGCTACTGAAGTTGACACTCTGAGGGTAAACGTACAGCAGATTCCTGAGGGGGAGACGGAAGAAAACggatgaaataaatgaaccCTTATCTAACGGAGCGGCGATTGTTTAGGAGCAGCCTGTAGATGACGTAAACTGTCAGGTTCAGAGCTATTATATGGACTACCTTTAAAGCTTTCCAAAGACTATGATACTTTTATGTAACTTCTGTTCTTCTATTTCAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27627 True 926 lncRNA 0.38 3 9854603 9859173

Neighbor

gene id symbol gene type direction distance location
LOC122332778 NA coding upstream 50217 9803573 ~ 9804386 (+)
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding upstream 58071 9795789 ~ 9796532 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding upstream 61214 9792656 ~ 9793389 (+)
hbbe1.1 LOC107587921,LOC107596825,LOC107674643,LOC107703325 coding upstream 64439 9789355 ~ 9790164 (+)
LOC122341659 si:ch211-5k11.8,hbaa1,LOC107587926 coding upstream 68480 9785282 ~ 9786123 (+)
angptl8 NA coding downstream 1290 9860463 ~ 9863218 (+)
elavl3 elavl3,LOC107754020,LOC107674672,LOC107703356,LOC106607222,LOC102780136 coding downstream 33360 9892533 ~ 9908575 (+)
nat15 nat15,naa60,LOC107690248,LOC107568044,LOC107685925,LOC107738623 coding downstream 61402 9920575 ~ 9927011 (+)
carhsp1 carhsp1,LOC107576530,LOC107733846,LOC107690249,LOC107590589,LOC107738622 coding downstream 67939 9927112 ~ 9941228 (+)
LOC122341833 tmem114,LOC107738619,LOC107685939,LOC107733824,LOC107690318,LOC107568650 coding downstream 116199 9975372 ~ 9982638 (+)
G18502 ba1,ba2 non-coding upstream 70145 9775320 ~ 9784458 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 251539 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 278701 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 280114 9574289 ~ 9574489 (+)
G18456 LOC107672431,LOC107587937 non-coding upstream 280341 9573184 ~ 9574262 (+)
G18517 NA non-coding downstream 6613 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding downstream 51784 9910957 ~ 9911612 (+)
G18671 NA non-coding downstream 414801 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 712646 10571819 ~ 10579144 (+)
G18747 NA non-coding downstream 730349 10589522 ~ 10589819 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 54807 9798815 ~ 9799796 (+)
G18491 NA other upstream 104723 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 156688 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 668943 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 671313 9138467 ~ 9183290 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 166645 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 832717 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 893586 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1474568 11333741 ~ 11335825 (+)
G18949 NA other downstream 1509720 11368893 ~ 11369752 (+)

Expression


Co-expression Network