G18517


Basic Information

Item Value
gene id G18517
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9865786 ~ 9943153 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27641
CTGGGCTAGACGTAGATTTATCATTTTTGAGAagactgaatttttaaaatttggtatatatctatttttttatatgtattttaaaatgagttcattcaggtgatgcaaagctgaatttttagcatcattacagtcttcagtgtcacatgatgctttaGAAATATGCTAATTCAGTCTAATATGCTCTGttggtgatttttttatttattttttttttttttttttttttttttttttttattaatcAAAATGTCAGATTTATTTGAACAGATTTATTATAGCTTCATCAGacaacatttagattttatgtAGAAATGACGACGgtaatttttctatttgtacTACACGACTGTAAACATCTGCATCTTTTAATAGAATTGTTAGTGTCTGTATCAATAATACACATCTCAATTAAATACTGACTTAGCCGAATACAGACGGACGGCTTTCTCGACTCGCTGCTGCCCGCGCTGCCTgtccacatttaaaaaaaaaaaaaaaaagtttaaaaggcATCCAAAACAACATGAATTACATTTCTACAATACACTAACATATGGGACACAATATCACGAAAGAATAACACGCCATTAGATTTCCTATGCATGATTTGATTTGTTAACGTCAGTTAAATAACAAACTCGAGTCCAATGCGGCTGGAAACATTTTAGTGTTCACGAACAAAACTTACACGATGAGCATTGCATAATCTGACTACAGCAAGTACGTACTGGGGTTTAAGTGTTTACAAAAGGAAAAGACTGTTAGCTTTAATAAAGCTGAAGGGACATTTACTCTGTCGGCTTGGAGCAATGGGAAGAGGAGAATCACCCCAAACATCATAAACCTTTACAGGCTGTGATAACCATTAATTGAAGATGACTTTGCAGTTGTTATCCGGCGGAACAGTATACCTGTAATGAGAAACACGAGGGGGATCATGTTCACCTCAAGCTTGTGCTTGTCAATGCTTCCTGATGGACGCCTATTGTTtggctttggaaaaaaaatacagatttatggCCTTTCGTTCTCCGCATTGGTTCTGTAAGATTGTAGAAAACATCAGCCCTCACGTAACCACACCAGGTTGTGCTTTAAAAGTTTGTTCTGGATGAAATTATGCTCGCGTTTCGAACGGGAGGCCTCGTGTCAGTCGTGACAATGGTTCTTTATGACACGGCGGAGCGGCCACCTTAATAAAAGGAACTGGCTGATTGCTTGAAGGTTTTCATCTCAACAGGCTTCTTATTAAAATGGGAATAGAGGCTCTACAGTTCTCTGCACTTTCACTTTTTCCAGCTTTCCGTTGACAGTGTTTCAGAATGCAACGAGGCCAATGCTGCTTCCACGATCGGCCTTTCACACATGCTTTTAATTCAGAGAGGACTGTTCAGGTACTCTCTGAATTCAGTCTGCCGTCATGCAAAAATTTCCCATTTAAGACATTTCAAATACAGCCATTTCTCTATAGATACTAAAATAGTTTGATTTTATCTCCACGAACGATATAATCAACCAGACGATAGCTTTGGTGcttatctttttaaattatctttttatGTTGCTTTCCAAATGCTAagggctttttttatttgacaaaaaagggTATACGTAATATTGCGAAATCCTGTCTCTGTGGTCACTATATTGCTGCTTGTAAGACCTTACGGGCCACAAACAAAGTTGTGAGAGATTTATTTGAGTGTCATTTGAGAGGGTTATTTCCTGCAAACTCCTTCAGATCTCCGGTCTGTTCAGTGTCAGTAAAAGATGAGAATATGGTGATGGGGCAATATCTGTCTGCTAAATAAAAAGAGATAGAAAACAGATTTCTATCTTTCTTAATTAGTTATGACAGGAAGAGAGCGAAtgaaacgagagagagagacggtgaCCGATTAATTGTGACAGGCTGGTATAAACCCTTGAGTGGGCTTTGGCCCCTATATGCTCTATAATCAAGGCCAACCTGGCAACCAGAACTCTATTTATGCTCAGCCAGGACGTCGTTCAGGATGTTCAGCAGCTGATGGACGTGGTACTCCTTGAAGACCAAAGCGGGACGGAAACGGATGGTCTTTTCTCCACAGGAACCCATAAACAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27641 True 2109 lncRNA 0.31 3 9865786 9943153

Neighbor

gene id symbol gene type direction distance location
angptl8 NA coding upstream 2568 9860463 ~ 9863218 (+)
LOC122332778 NA coding upstream 61400 9803573 ~ 9804386 (+)
LOC122331228 LOC107596828,LOC107596825,LOC107703325,LOC107587921,LOC107674643 coding upstream 69254 9795789 ~ 9796532 (+)
hbbe1.2 LOC107703325,LOC107587921,LOC107596828,LOC107596825 coding upstream 72397 9792656 ~ 9793389 (+)
hbbe1.1 LOC107587921,LOC107596825,LOC107674643,LOC107703325 coding upstream 75622 9789355 ~ 9790164 (+)
LOC122341833 tmem114,LOC107738619,LOC107685939,LOC107733824,LOC107690318,LOC107568650 coding downstream 32219 9975372 ~ 9982638 (+)
sept12 sept12,LOC107690244,LOC107568113,LOC107738615,LOC107685931,LOC107733855 coding downstream 299357 10242510 ~ 10296401 (+)
flr flr,LOC107568145,LOC107733869,LOC107738612,LOC107568167,LOC107680859 coding downstream 430949 10374102 ~ 10385643 (+)
alg1 alg1,LOC107733873,LOC107690237,LOC107738611,LOC107680860 coding downstream 447357 10390510 ~ 10394344 (+)
LOC122341728 lgals2a,LOC107690239,LOC107733834,LOC107568668,LOC107680883,LOC107568169 coding downstream 454690 10397843 ~ 10401045 (+)
G18507 NA non-coding upstream 6613 9854603 ~ 9859173 (+)
G18502 ba1,ba2 non-coding upstream 81328 9775320 ~ 9784458 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 262722 9602642 ~ 9603064 (+)
G18458 LOC107672431,LOC107711167,LOC107587937 non-coding upstream 289884 9574881 ~ 9575902 (+)
G18457 NA non-coding upstream 291297 9574289 ~ 9574489 (+)
G18671 NA non-coding downstream 330821 10273974 ~ 10302050 (+)
G18744 NA non-coding downstream 628666 10571819 ~ 10579144 (+)
G18747 NA non-coding downstream 646369 10589522 ~ 10589819 (+)
G18757 NA non-coding downstream 695936 10639089 ~ 10639293 (+)
G18763 NA non-coding downstream 720093 10663246 ~ 10664532 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 65990 9798815 ~ 9799796 (+)
G18491 NA other upstream 115906 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 167871 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 680126 9184399 ~ 9185660 (+)
brd4 LOC107711252,LOC107587947,LOC107672460,LOC107670433,LOC107757365,LOC107563328 other upstream 682496 9138467 ~ 9183290 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other downstream 82665 10025818 ~ 10103461 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 748737 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 809606 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1390588 11333741 ~ 11335825 (+)
G18949 NA other downstream 1425740 11368893 ~ 11369752 (+)

Expression


Co-expression Network