G18602


Basic Information

Item Value
gene id G18602
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9589921 ~ 9591291 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27759
TTGATGtttcatatgcatttatttggatGACTGCCTGATACAAATCGGTACAACAAATCTAGACCTCCTGGAATATATAAATGGAGCTCTCTCAGTTGTTGGATGGTctggaaagaaagagaaaacatgATTAGATCAGAGAAAGCATGGCTGTTGCTCGTTTTTGGCTCGGTTTAAGGAGGACTCACTTGGCCCATTCCACGTTAAGAATGAGATGATCGTATCCGAAGCCGGACACACCGGCAATGGCTCTGGCAGCGTCCTCACGCCGGTGGAAGCTGATGAAAGCAAAGCCTTAGACTGGCCTGTGTTCTTGTCCTTGGCCAGGTAGATCCTAGAGATGGAGCCGAAAGGCCTGAAAAGCTCCTGCAGATCTGTCTCCCTGGTGTCCTCGGACAAGTTGGTCACACGGATTGTAGCATTATCGTCAGCTGCAGAGAAAACAGCACCACGTTACCAGTAGGCTCTCGATTAAGAACATGGTTTGAGATGTGAATATGAAAGACGTACCTCTGCGGTTAGGCTGCATGGACTCTCCTCTGCGCGTACCACCGTCCCGCAGACTGGGGGGAACATACTTCCCCGTCTTGTTTTGGACCGGTTGGGCAGGTTCGGGCTCTGGATATCGAAGttaaattgctttaataaagcaaaatatgaaTGACATTTGCATAACAGGACAACACGAATTTTGCATACCAGCTGCCTTCTCTTTTTCCCCCGTGGACAGACCCAGCTGCTCGGCCAGCTCTTTCTGCATAGGGCCGAGCGTGTCTTTGTACGGACAGCGGGTGGTCCAGTGGTCCCCTTTACAGATACGGCAGGACACGATCTTCTGTCCTTTAAGCTTGTTCATGGGATCTTCATCTTGGTCTTGAGCGTTCAAGTCCTGCGAAACAAGCAGAAGAATCACTTCAAGTTGGCGTCGGTACAACAGAGAAGTGAAACACTTCTGGGACTTCAGTATCAAGTCAGAACGGAACAGTTTAAAAACACTCATCTGGCAACGCGGCGACAAACTTGTTCATTTAAAGAATAGTTAACTAATAAtagttttctgaaaatgtactcgctttcaggccatccaaaatgtagatgagtttgagAACAAAGATGCAGAAATACAGCATTACATCAGTTGCTCACTAATTACCCTTTTTAGTAAAtaggtgccgtcgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27759 True 1180 lncRNA 0.50 2 9589921 9591291

Neighbor

gene id symbol gene type direction distance location
angptl6 LOC107672431,LOC107587937,LOC107711167 coding downstream 12311 9569453 ~ 9577610 (-)
icam5 NA coding downstream 20594 9563751 ~ 9569327 (-)
trip10a trip10,trip10a,LOC107596831,LOC107670505,LOC107672474 coding downstream 26539 9538376 ~ 9563382 (-)
rdh8a rdh8a,rdh8,LOC107587939,LOC107672484,LOC107711264,LOC107757358,LOC107563317,LOC107670529 coding downstream 248918 9333096 ~ 9341003 (-)
notch3 notch3,LOC107711261,LOC107587940,LOC107757359,LOC107670473,LOC107563318 coding downstream 295072 9265773 ~ 9294849 (-)
dnmt1 dnmt1,LOC107587934,LOC107672482,LOC107670489 coding upstream 1024 9592315 ~ 9605013 (-)
s1pr2 s1pr2,LOC107711272,LOC107587933,LOC107672500,LOC107596814,LOC107754042 coding upstream 15993 9607284 ~ 9629912 (-)
ubald1b ubald1b,LOC107754052,LOC107672511,LOC107670507,LOC107596822,LOC107587929 coding upstream 83927 9675218 ~ 9678951 (-)
rhbdf1a rhbdf1a,LOC107587928,LOC107711277,LOC107596807,LOC107672493,LOC107754036,LOC107670513 coding upstream 106773 9698064 ~ 9740157 (-)
nprl3 LOC107711278,LOC107596811,LOC107754028,LOC107670498,LOC107672508 coding upstream 170039 9761330 ~ 9774275 (-)
G18599 NA non-coding downstream 18116 9571600 ~ 9571805 (-)
LOC122342127 NA non-coding downstream 56134 9512446 ~ 9533787 (-)
G18439 olfm2,olfm2a non-coding downstream 104566 9481321 ~ 9485355 (-)
G18426 LOC105357980 non-coding downstream 175914 9413404 ~ 9414007 (-)
G18388 NA non-coding downstream 390219 9198608 ~ 9199702 (-)
G18608 NA non-coding upstream 55022 9646313 ~ 9646566 (-)
G18623 NA non-coding upstream 161944 9753235 ~ 9753522 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding upstream 193958 9785249 ~ 9786124 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding upstream 198325 9789616 ~ 9793185 (-)
G18638 LOC107703356,LOC107674672,LOC107754020,LOC107596819 non-coding upstream 310240 9901531 ~ 9908617 (-)
G18433 LOC107670519,LOC107563315 other downstream 127016 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 451832 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 582478 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1191093 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1370866 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 402542 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 803023 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1420645 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1820694 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 2102981 11694272 ~ 11714719 (-)

Expression


Co-expression Network