G18671


Basic Information

Item Value
gene id G18671
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10273974 ~ 10302050 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27867
ttttttattttttttttTTATTTTGTACAACTTTTACTAAAACGGTGCAGACTGGAACCAACCAACTGAAAACAACAACGCTTGTCTGACAAGGCACTGCAGCCATGAGATGGAGTTCATAaaactttgtcttttttctctttcattttaaattaaccaCTACAACAGTATTTACAGAAAGAAATGTACCCCAAAGAACTGAGAGCTGTGACATGCCTATGTCACACCAGAGAAATAAaataccaaataaatgaaacattttttagataATCAGTGTGAGGCAGATATTTAACATTGCTCATTAGGCTGTTGAACCACAGTCACCCAAACCAAGTGTTTGCACCAGAATAAAAGTCGTTGTTACGGACCCTGTATGAATGTCAAAAGCATTACTAATATTGGTTTAGTATGACATGTACAAGTACATACAAAGAGCCAACAAAAgagttgttttctgttgttgaATCGTTGTTCTCAAATCTTATAAAAGAAACAATCCTGACATATGTTAGTTGGGAAGAGTTAGAGGAACAGATGATTTATTCTATTCGCTTAACAATTAGAAGCGCCAGACATTTAGAGTTAAAAGCAAGCTGGAGGGTGAACAGAAACTGCCAACACACTCTGGATGTGGTAAGCTAGTAAAACCCCTTCAGAGAGCAAGAACAGAGGAGCACTATTCGTGGAAACTGGCCTtgaaaatggtttaaatttacAGTGTAAATCAGACAGAACCACTCCATATCTGCCAGCCAGATTCGTCTGGTAAGAAAGCGAAATTCACACAGTAGTACCAGTATTTCATTGACTCTCATTGAAAAGCAAGCCTGCCTCGATCGCATGAGGAAGCCAGCAGGCGCAACTTCAATGTAGACACACAATAAACATCTGTTAATGTTCTTGCATTTAGCCCGTATTAACGTctttgatattagctcaatgtACAAAGTGAAACAAGCTTAAGTCTTTTATACTATCCATTGCTGATGTTACTCATCGCTAAAAGACCTTTTTGCATATCTTGCCTCTTTCTTGATCAGGTTTCTCCACTGGCTTCGTTGAAAGCGGTATGGACGCGTGCGCTTAGAGCCAGGCAGCCTCAAAATCGCTGAAACCTTCTGACAGATGACCCTCGACATATTGATAGATATTTACAGATTACAGCGGGGTTAGTGCATgagttattatatttatatttagggtTCTATTAGGTGAAAAAGTTCCCACACACATAAACTCTCATTCTATACAAAGAGGGAAAAGGCTCGGTTTGGAAGTGAAAACGATAGTATTTATACAAGATTAATACAATATCTCCGACAGTTTCATACAGTTGTCCTCAAATACTATGCAATGCCTTAGCGATATATTAATAATCTCTCTTTATTTCATTCATCTCAAATGGTCGTTTCTATTATGGAGACATACGAAGTGAAAAGCGCTTTGATGGGATTTCCTTCAGATCTTTGCTAGTGAATAAAACCTGTCGCATTCTTTGTAAGACTATCAAATGAGTGTAAATACTGCAATATGTCTTCTAAGTTCGAGCGCAGGCATATGAACTGTTGCAGAATATTTAACATCCAATTATGGACACAATGTTGATTCACTATTAGGCTACTAGACTTCATGACAGCGTCTCTCAACTTACACCCAAACTCTCAACTTtacaaccaaaaacaaaagaggtGAACTAGAACAGTCGTTGAACACAAGAAAATGGCCAGCAGTAGGGTTAGAAAAGTTAGGTCATTGTCAGCGTCTTcccgccaaaaaaaaaaaaacatcctcagAGACCGCGCTTATTCTAACCGTCAAAACCATGGTCATCTGAATAAAGCTCAACTCCAATCTCCATAGTAGACCCCATCAAAATAACATGTTCTACTCCTAAATAAAACTCCTCGCaaaggtaataaataaataaataaatatgtgcgTTGTGTCAATAAATTAACCCGCTACCAATGATaagtaaaagcaaataaatacgTAACAACTTCAATGATTCAAAAGATAAAGTCACACAAGGTAGCGAGATTAAAAGTCTCTGGGGATCTCGCCTGGATAAGCGGCAGCCGCTAACCCTGATTAGCTGTGACCCCCCCCATTAAACAGGTCACTATTTACAAGAAGAGAGATCGACTGTCTGAGGTGAGTGCTAATGTTTATGCTAATGTGTTATCTTTAAAGCCTGGTGAATTTAAAGTGGGATAGTGTAGCATCCACTTAAAGACTGTGATGTTGGAATTATCCCGACATATTTTCCATCTGTTTTGTTCtacacttttttaatgtttgaatcTAAGAGGTTTATAATAGCTGGAGAAAGCTAGAACTGTCATTCATCTCAACTGTACACAAAATAAAGGTTCCTTACTGGCAAAATGGTTGTTAAAAAGAACTGTTCACCGCAAGATTCTTTGGAAAACTGAATATGGTTCTTCAGTGCCATCACTCTAcgaacatttgcatttaaaagataGCTATTGAGTCAAAATATGTCGTTAATTTGGATGGCTGCTTTTTGCATCCAGATGATGAAGTTCAGGCATGTACCAGCAGGGGCGCTAACCAGCCGTGGTTTGAGTTTAACAGCATGCCTAAAATTCGAATAGTactttactgaagaaaaaggTACCACATTGCATGCGCTACTACCATATCTGTTGAAAGATGATGAAAATACTCATAGGTTAACACACTTCACCAGCTACAACGTAGGGGtggcttttaaataaatgattggcCAATCTAAGACTCCAAAATTTTTCACCATGCCATTTCTTCTGCTACTTTATATGTTTGAGTAGGTGAACATTAAGGTCATCGACATCACATCAAACCCATCTGAGATGATCTGAGCAGCACGTTAATCTCCTGAGAGGACAAATGCAGGGTTTGATACGGGGTATGGGATACGGAGTGggctggaaaacaaaaaaatggctgGTTTCTGCGAATCCCCCTGCGGACCTGTATTCTAACATACCCCATGGTAAAATGAGGTAGGCACCACAGATGAGCACAACTCTGAGGAGCGAAGAACCCGGGCACCTCTGAAAATAAAAGGCGCTGCTAATCTAAAAGCAGACATGTGGGTATTGCTTAACAGGAAAGCAAAACTGCTAGATGAAGAGAGACTACTGTAATATGCTTGTGTGGGATGTCTGTGATCACTTTAATTACACTGGCCTGCCTCTGCATTTGATGCAAATCACTGTAAACCGTATTCATCAGATGTATTTAAAAGCACTCAGGCTGAAAGAGACACTGTAAGAAACTATGGTAGAACCGCCATGCTGTACGCTGCTGTCATGTTTTGGCCTGGTGACAAGTAAGCAATGACGTGCAGTTTCAGTCTATGAAAGGCTGTCACGTGGCCCAGGTGCATTATGGGATCGCATCTTCATTTGAATCAGGATTAATATGGAAACCTGCACATGAGCCACTAATATCAATCGACATCAAAatggaattaaaataaaacaggcagATGAAAAAGCCAAGCTATCTTTTGTACAAACCACAGTCCCtttgaattatattaaaatgttatgagCAGTTCCGATCCGCCCCGCTCTCCCCGACTCGAAATATCTGGAAATGTCTTTAAAAGAGCAATCTGCTGGGAAAAATAACCTCCTGACTTCTGATTATGCTGGTTCCTTTCAAAGGACAGTACCTCTTAATACTGTACCTTCACCGTACCTGGATTTCCATCTTATTCAAAGTGTCCGAAACCTCGAACTCATACCATAAATGTTTCACAGTAATCCTTATCAtcaaaaataatacttaaaaaaataataatatttaaaaacaaaaaagaccaAAAGAGAACTGCATGACAAAAAGCAAGTAGCGTTGACGTGAAAATCTGCGTAGCTGTTCATCTCTAaagttctctttcttttttcccttgaTAAGACACAGAGATGGAGCGGCAGCACCACTGAGGGGAGCGAGAGACCCGGATGACGCCGGACAAAAGCGAAGAGACCCTGTTGCAGTGGCTCCTTAACCTCGTTCTTTCCCTTAAACATTTCGGTTCCTCTCTACCTTTCCCTGGATATGAGAGACAGCTCAAACAGGCAGCGCACACCTTTGTCACTTCAAGATAAACAGTTTTGGATGAGACGTGGAAGCTAGTCTCACAGTTCAGTGGAGGATCATGTTTCATGTATGTGTGGGGGCTGATTCCTATGTGTCATGTTATTTAATGAAAGATCTAGCCTCTGACCCACTGCGCTTTGTACATTTTCCCTCTCGCTCTTCAGTCCAGGCCCGTTCCGACCTTTTCTTTCAGATTTCCCTTTTTGTCTTCCATGTCAGTGATCCCTCTTCACCCctccagaaaaaaaaccttccatTCACTTTCTCTCGTTGATTCTTCCTGTGGGTCCAGGATGAAGTTGGGTTTATCATCAGTCTGTAGGAGGAGGTTTTGGTGATGTGGTGGGTGCTGGTGCCCATGAAACTCTTTGCTCTACTCGATGACCATGCAGCGCGGCAGATGCTGGGAGTAGTATTTGAAGAGTTCGGCTGTGGCGCCCGGGCAGTTGGTTAGTTCCAGCTCCTCTAGCTCCTGCAGTTGGATCAGGCCTGATAGGCCAGTAGTGGTCAGCAGAGGGCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27867 True 4638 lncRNA 0.40 2 10273974 10302050

Neighbor

gene id symbol gene type direction distance location
LOC122341833 tmem114,LOC107738619,LOC107685939,LOC107733824,LOC107690318,LOC107568650 coding upstream 291336 9975372 ~ 9982638 (+)
carhsp1 carhsp1,LOC107576530,LOC107733846,LOC107690249,LOC107590589,LOC107738622 coding upstream 332746 9927112 ~ 9941228 (+)
nat15 nat15,naa60,LOC107690248,LOC107568044,LOC107685925,LOC107738623 coding upstream 346963 9920575 ~ 9927011 (+)
elavl3 elavl3,LOC107754020,LOC107674672,LOC107703356,LOC106607222,LOC102780136 coding upstream 365399 9892533 ~ 9908575 (+)
angptl8 NA coding upstream 410756 9860463 ~ 9863218 (+)
flr flr,LOC107568145,LOC107733869,LOC107738612,LOC107568167,LOC107680859 coding downstream 72052 10374102 ~ 10385643 (+)
alg1 alg1,LOC107733873,LOC107690237,LOC107738611,LOC107680860 coding downstream 88460 10390510 ~ 10394344 (+)
LOC122341728 lgals2a,LOC107690239,LOC107733834,LOC107568668,LOC107680883,LOC107568169 coding downstream 95793 10397843 ~ 10401045 (+)
cacna1ia LOC107690236,LOC107733827,LOC107561340,LOC107680839 coding downstream 120696 10422746 ~ 10571227 (+)
grap2a grap2a,LOC107690235,LOC107680873,LOC107561352,LOC107732893,LOC107733828,LOC107551143 coding downstream 293594 10595644 ~ 10607509 (+)
G18517 NA non-coding upstream 330821 9865786 ~ 9943153 (+)
G18549 prkcsh,LOC107703311,LOC107725022,LOC107754018,LOC107587972 non-coding upstream 362362 9910957 ~ 9911612 (+)
G18507 NA non-coding upstream 414801 9854603 ~ 9859173 (+)
G18502 ba1,ba2 non-coding upstream 489516 9775320 ~ 9784458 (+)
G18470 dnmt1,LOC107670489 non-coding upstream 670910 9602642 ~ 9603064 (+)
G18744 NA non-coding downstream 269769 10571819 ~ 10579144 (+)
G18747 NA non-coding downstream 287472 10589522 ~ 10589819 (+)
G18757 NA non-coding downstream 337039 10639089 ~ 10639293 (+)
G18763 NA non-coding downstream 361196 10663246 ~ 10664532 (+)
G18792 NA non-coding downstream 398227 10700277 ~ 10700619 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 170513 10025818 ~ 10103461 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 474178 9798815 ~ 9799796 (+)
G18491 NA other upstream 524094 9739796 ~ 9749880 (+)
aanat2 aanat2,LOC107672440,LOC107670449,LOC107588006,LOC107596820,LOC107754039 other upstream 576059 9692949 ~ 9697915 (+)
LOC122341719 pet100,LOC107563330,LOC107672445,LOC107587949 other upstream 1088314 9184399 ~ 9185660 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other downstream 389840 10691890 ~ 10698540 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other downstream 450709 10752759 ~ 10842507 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other downstream 1031691 11333741 ~ 11335825 (+)
G18949 NA other downstream 1066843 11368893 ~ 11369752 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 1471150 11773200 ~ 11833924 (+)

Expression


Co-expression Network