G18745


Basic Information

Item Value
gene id G18745
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10574167 ~ 10579140 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27965
TCATAAAGTCTCAAtatcttaaattttatttcatacaatacattttacaatgaaatcTTAAGCAGGACCGGTGGTGAATGTACAAAGGTGAGAGAGGACACCTCAGTCTCCGTTCTCAGTCAAATCTTTTTGGAAGTCACACCTCTTTATTGCCACCAGGctaaatatatacactaaattACAAGgtacattttttcttcattgttcATTAttgcacaactttttgtttggtttttatatgaacagaatcaacaaaataaagcaatcgATCCATTTTGACAATATAGtacaaagaaagcaaaaataaagtgttatgtatacatatatttatatatatatatatatatatatatatatattcataaagtCTTTCATATAAACAGCCTCTCAACACGATAAAACCAGTCAAACTGCAGCAGAAAGCCAGAGAAGTAGCGGTGAGTAAAGCCACGCCCCCAGTGATTTTGAGTGACAGCTCAGCTGATTGGGCTTGCTCGTAGGAAGTACGTCCCACTCATGAAAGCTTAATCGTTTGTAAAGTTTAAGCACCCTTAGATAGCTTGAAACGATCCTGCGCAAATTTACGTCTTTCATTATATTCTGTGCTCTCAATCTTTAAACACTATATGCTTTACAAATACAAGTCACCTTCTAGATTTTCTATTCCACAGACCCATAAGACACGGGACACATCAAACAACCATAATaagcttaaaatatttcacCTCCCCATTCCGCCTCCCCTTTCCTCTGAAGAGCTCTCATCACGCGAGGTATCGGTTTCTGTGATGCTCAAACCCATCTACTATGCTTCACTCTCATCCAGCTCACACCATCCGAGATCCATTGGATTTGCCACTCCATCAGCTGCTGCGTAAACACTGTGAAGATGTTAGCATCCTATATGTGCTACCAAGCATAAATCTTTCTTAAAATCCCCCAGTGGATATCTAGTGGCTCAATCGCTGCATCAGACTGCTGGGATAAAGGGCTCTGTATGTTAACAAATGTGGAAACATGACATAAGGCTGTGCTTCGTACTGTTCAAACAACCGATAATGAGACCATTCATCTCTCTCTGCTGCCACTCGAATAAACTAAATGGATAGAAACACCCAAACACATCACCCATATATACTTGTAAATTTCAGCATCATGGGTTAAAGAAATCTTTTTCCTCAGATTCACACAGTTCAAACCCTATATGACTTACTTTATTCTGTGCagcatgcaaaaagaaaaaaaaattccatgcaattttaaaaaatggtgcTTTCAAGCTTTAAAGCAAAAGTACTATAAAAAGCACAATCAAAGTGGTCCATAGAGCTCATGTGCAATGCAATATATTAGTGATTAGGGCGAGAAACAGACTGAGATTTAGGTTGCCAAACTCAGGAACTGAATCAGTGagtgaataaatcatttagaCTAGTTTCGTGGACCagattaaaaaatagtaaagaaTACACTGAAAACATGTGACTGAAGTATTTAAATCCATTGTTATTGGTAAGACTGGACCACTAAAAATGTcttaagtcgctggggtatatttataacaatagccaaaaatacattgtatgatTGTATCATTATGATATTAAGTAAGGTCATGTtccatcaatggaaagcttatttcttCAGCGTTCAGATATTGTATGAATCTCAATTTAGAAAAAGTGAcacttatgttttgttttttctttttagtccAGGTCACATATTTTGGCCGTGTGTACATCCcagatgttttataataatcatatttttcttaatcatCTTGGAGGATCATTACAGAAAACCCGCTACAGAAATGTTTCCAAAAGAGCCGTTTCCCACTTCCACTTTCTATGCCATGATTAATTTCATAGACGATGCAACATAAAACCCATGCAAAGACAAATGTGAAAATCCCAAATGATCCATCTTCCTCCCTCTTCTTTCAGCGTTGGCTTTCATCCCGCTCTCTCATCGTCtgccatctctctctcctttcccCCTTCTTTCTGTCCATCTTTCCAAAACATCAAAGTGTTGGAGACATCAGAGGACTGATGTGAGGAGATGCTaatgcatccatccattcattcatgcaCGGCTGGGACCATTCGATTGTGAATGCGGAGCAGGGGCCCAGAGTCTACCCATCCGCCCAGCCTTCTGGGGCTTCATGCAAGTCCCACATCTCCTCTTATATAGCATTCAGCAATTTGTAGCTGATTTGTATCTGTATAGAGATTTCACAGCCAGGCGCTTTGGTTTCTCTCTTCATGAATGACTAAGAGAATCATAGTAACGTGTGCTATAGTAACATCCTGTGCTGGAGGTGCTGGCTTCGGACTGGTTTCCTGGAGCCCGGGGCTATACAACATATGTCACCCAGACAAACAAGGGCTATTTTCAACCTGTTTGTAGATGTCTGTGGGATGTAGTGTATGCGCCTGCTGTACCCTTATCACAGCTTTTCAGACCACATACTCCTTATTTCTCTCTCGGCGAGCTGCTATTTTCTATGAAAGCAGAGTGGTACAGTGAAAAGGAGTGGCGTAGCCCTTGTTGGGGCCGTATAGTGCAGAGACGGTGGCTGTAATGGAGAGTTTGAGCATCTCTCGTGTATACACAAAAGCCACAGCCAATGATAATCGGCTTTTGAGAACGAGCGGCGAGCACAGACTGCATCAATGCGCAGGGGCACTTTCGTTTTTTAATGGCCCTTAGCGCACAAGTCTCCTAATTGCCATGATAAATATGTAATACAGTCCCAGGGGCCGTTGCCTAGTGTGAACTTGCAGTCGCGCGCCATGCACAAGTTGAATTTTCTAGAGGCACACCAACGCACGTGCAGCTCAACGTTTACaaggaaggaagaaagagagaaagacagataaGGAGAGCAAAGGGTGAGAGAGAGCATTTTGTTGTGACAGATCAGGAGCTGCGCACGGGGTTGATGAAAAACGGCAAATGCTATCTTTGCATCTCCTTTATTCTTCATACAATAGGCCAGCGTCATAATTGCTACAGAGAACATGACACATCAGGAATAAATTGCTAGTGATTTTTTGTCTCTCAGCGCCTATCTGCAACACTGCTTGCCGCTGTATTAATGTCAACCCGGGCAAAACAGTCTTTGAGTAATCTCTTTCCAATATTAGCACTTCACATTCTAATAGAAAAACGGATGAGGTTTTTTATCGAGTTAATATACCGCGTGAATGCAAACAAATGGTCATTTAAATGAAGCGGAACGAAGACGAAGAGGGACAGTAGAGGCTTTACCTGCTGTGCATGGACCATGTTAAACAGTGACACAACATTCAACTAGACAAATGAGCAGCCTTTTAGTCTTTTGCGCTGAACTCTGAATCAAATCCAATCACGAATGCAGCCGCGCGTGACGATATTGATGTGATTGCATCATGACATTAGGATGCAATTAGCAGTGAACACTTCTGTTTTGGGAGTGTAGGCCTATAACCACCAGGGCTGAGAGGAAGCATCACTAAAAGCAGCAACACATctaatttattaactttttttattttatttcagcagtgGCACAAAATGGTTTCAAATTAGTTTGCTTTCTCACTTGAAAAcgattaagtgctacttcactgtttttaatgtaagaCACGTACTCACATCCTGTCCTTGCTCAGGTAACATTGGAGAGCCTGATAATTTTGAATGAATTGATTTGTTcagatgtaaataaacaaacaaaaaaatgcttatagTGCAGCCATTTTTTTGACTACTTTAATTTAGCTACTTCCAATGATTAGCATTTTTCATGGTCTTTAACACTGACAATAACCAACGGCCAAACATAGTCTGCGCTTTCTAAGACCTTGcctttaaaataagatattgtACCATGAAAGCGGAAAAGATTTTACCTTGTTCCAGGCAGAAAACAGAAGTTAAGGATTCATGCCTCAGCAAATTCACTGAGAGCcctgtatatataatgtattgtcCCCTATAATGCTGAAGCATATTTGGATTTCCACAGAGCACTTGGTGCAGTCATTTAGCAAGAAAGATGTggattgcagtttttttttaataagagcAACATGCTCCGAATCCATTTCTGCAACGTGAAATGAGGTTCTGGAAATGGAGCCTTGAGCTAAGAGTTAGAATTCAACATGTTTGGCTTGATAAAAACAAGATCATGTTTGTTAAGATAAATAACAACATCCATGACTAATGACGACAGGAGGATATAGACACGGCTCGCTTAATTAATGTAGAtgcagcataaataaataaacagacaaaacatgctggaaataaacattgttatttttctgaccaagctaaactaaaaaaaaaaatcatgctctGATATATTGTTCACATTACTACTTCAAATCAAATGATTCtgcaaatgtttacataaagcATCGGGCAACTACTGCATTTCtctcaaaactttttttcttatcttACAGCATCATTATATGTAAAGAAACAGTTTTGAAGTCAATTCGAAATAACTCAAACAGGTCAGAATTAAatatcctgttttttttccttttctgcaCCAAAAACGGCAAGATACTAGTTAACATGAGCAGCAACTAAaggatttttcatttcaatagcTGAAATGAACACCGAAACAataaactgcacattttagTGGTGCCCTAATTTAGATGCTTACTATTGGGCCATAATTCAATCACAGGCAAGGTGAGCCTGGGCAAAATTAATAACAAAGATTTGACACTTCATAAGCCTGTCGTAGCGCACACAGACAAGCCCAGACAGTAGCAGGCCTGCCGCACCCTAACAACAAATTATGATGCCGTCATTGCAAATAAGAATCATCATCAGTCTCAGGCCCCCAAAAAGATCTCTCTCATTTCCAAGTAAGGTTCTGGGGCAAGGATTTCAACCCAAACACCTGCCGTCTCGAGTCAGGATATGAAATTTATTCCAAAAGTTTACTTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27965 True 4974 lncRNA 0.39 1 10574167 10579140

Neighbor

gene id symbol gene type direction distance location
c3h16orf89 si:ch211-76l23.7,LOC107738634,LOC107568163,LOC107733838,LOC107690316 coding downstream 185094 10385450 ~ 10389073 (-)
si:ch211-76l23.4 si:ch211-76l23.4 coding downstream 201964 10370056 ~ 10372203 (-)
gsg1l gsg1l,LOC107690243,LOC107738642,LOC107685933,LOC107568433,LOC103031039,LOC108436662 coding downstream 227860 10332223 ~ 10346307 (-)
fbxl16 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107733860,LOC107568127,LOC107690242 coding downstream 258441 10297430 ~ 10315726 (-)
mettl22 LOC107738618,LOC107733833,LOC107590588,LOC107685927,LOC107568640,LOC107690247 coding downstream 599606 9964451 ~ 9974561 (-)
cyth4a cyth4a,LOC107551152,LOC107690334,LOC107733836,LOC107561350,LOC107680872 coding upstream 39291 10618431 ~ 10625491 (-)
LOC122334005 LOC107680844,LOC107561345,LOC107732849 coding upstream 99874 10679014 ~ 10687531 (-)
LOC122334013 LOC107680844,LOC107561345,LOC107732849 coding upstream 110279 10689419 ~ 10693664 (-)
apol si:ch73-233k15.2,LOC107690330,LOC107729516,LOC107561347,LOC107732904,LOC107680847,LOC107551140 coding upstream 119853 10698993 ~ 10702733 (-)
rpl3 LOC107680866,LOC103374755,LOC107687640 coding upstream 199770 10778910 ~ 10782591 (-)
G18717 NA non-coding downstream 171956 10401833 ~ 10402211 (-)
G18638 LOC107703356,LOC107674672,LOC107754020,LOC107596819 non-coding downstream 665550 9901531 ~ 9908617 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding downstream 780982 9789616 ~ 9793185 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding downstream 788043 9785249 ~ 9786124 (-)
G18623 NA non-coding downstream 820645 9753235 ~ 9753522 (-)
G18771 NA non-coding upstream 98317 10677457 ~ 10678580 (-)
G18795 LOC107732905,LOC107729518,LOC107551141,LOC107551149,LOC107690331,LOC107680850,LOC107561346 non-coding upstream 110024 10689164 ~ 10697539 (-)
LOC122334019 NA non-coding upstream 110279 10689419 ~ 10695504 (-)
G19019 LOC107561356,LOC107680886,LOC107732897,LOC107551139,LOC107729558,LOC108434911,LOC107687643 non-coding upstream 188160 10767300 ~ 10769398 (-)
G19108 NA non-coding upstream 754616 11333756 ~ 11335800 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other downstream 177826 10394314 ~ 10396341 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other downstream 363551 9993833 ~ 10210616 (-)
G18433 LOC107670519,LOC107563315 other downstream 1111262 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 1436078 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 1566724 8992714 ~ 9007443 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 432796 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 832845 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 1115132 11694272 ~ 11714719 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other upstream 1133680 11712820 ~ 11728001 (-)
G19383 NA other upstream 1274608 11853748 ~ 11880959 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G273765 NA non-coding CI01000069 null 1909950 ~ 1911444 (+)