G19108


Basic Information

Item Value
gene id G19108
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11333756 ~ 11335800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU28458
tcacacacacacacacacaattaatgtgaaaactgtttatttctgttaatgttAGAATTTGTGTTAGAAGCTTGTCCATCAGTATTGATCAGCATCTGAGGGGACAAACAGTTGAGACAGCAGGGGGCGTCCTGCTCAGTGGTGAGATTCCTCGTAACCGGTGGGCAGAGGGTTCGTATGAGAGTTGTGGAAGAGAGAGTGATTCCCATCACCCCATGGCCATGGCCTTGGTTCGAATGCGGAGGTGTGGGTACGGCACAAACTCTGGGTGATCATGGGAATGGGCCAGCATCTTCATGTAAGTGTTTGCCATGCAGACACCCACACCAGGCAGAGCTAATACAAAGGACAGGTGCTTCCAAAGAGGTTGATCAGGTGTTTTCGTTCTTTGTTTCTCAGTTATTAGCTACTTTCTCTTTCTACacctctgtctgtttgtcctTTGGTCTGTCCTGGCCTAAACCATGAGACTCCTCCCCACt
>TU28460
tcacacacacacacacacaattaatgtgaaaactgtttatttctgttaatgttAGAATTTGTGTTAGAAGCTTGTCCATCAGTATTGATCAGCATCTGAGGGGACAAACAGTTGAGACAGCAGGGGGCGTCCTGCTCAGTGGTGAGATTCCTCGTAACCGGTGGGCAGAGGGTTCGTATGAGAGTTGTGGAAGAGAGAGTGATTCCCATCACCCCATGGCCATGGCTGGTTCGAATGCGGAGGTGTGGGTACGGCACAAACTCTGGGTGATCATGGGAATGGGCCAGCATCTTCATGTAAGTGTTTGCCATGCAGACACCCACACCAGGCAGAGCTAATACAAAGGACAGGATCTTCCAGGTCCTTGCTGTGTATGATTCAaatcattaatacatttaaaacattttgatgagTGTAGTATAGCGTAATATTCTTGTGTGTCTTCTCAGTGtttgtaaatagttttaaaatcatgatttttttttcaacatttttgatttttcagATGTGATGTCGCTAAACTTTGCTTACAACATAAACCTGAGGTAATAAAGTCATAGTTTATAATGGTTTATGAGAACTTTTCTATCTATACTGGATGACATCTgcttattttattgtttcatcTAGACCATCCTAAGAAAAACATCTCAAACCTCCTCCTTCATGGCTTCCATGTGATGCAGCGGCAAGAACCCGGCGGGCCACCACAGCAGTGGGAGACAT
>TU28461
tcacacacacacacacacaattaatgtgaaaactgtttatttctgttaatgttAGAATTTGTGTTAGAAGCTTGTCCATCAGTATTGATCAGCATCTGAGGGGACAAACAGTTGAGACAGCAGGGGGCGTCCTGCTCAGTGGTGAGATTCCTCGTAACCGGTGGGCAGAGGGTTCGTATGAGAGTTGTGGAAGAGAGAGTGATTCCCATCACCCCATGGCCATGGCTTCCATGTGATGCAGCGGCAAGAACCCGGCGGGCCACCACAGCAGTGGGAGACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28458 False 482 lncRNA 0.59 3 11333756 11335800
TU28460 True 726 lncRNA 0.48 2 11334983 11335800
TU28461 False 281 lncRNA 0.55 2 11334983 11335800

Neighbor

gene id symbol gene type direction distance location
LOC122341295 LOC107658409,LOC107583094,LOC107729429 coding downstream 7395 11313508 ~ 11326361 (-)
paqr4a paqr4a,paqr4,LOC106601588,LOC105897660 coding downstream 31066 11289917 ~ 11302690 (-)
coro1a LOC107729508,LOC107658445,LOC107583063,LOC107674167,LOC107563993 coding downstream 44724 11281806 ~ 11289032 (-)
ppp1caa ppp1caa,LOC108280818,LOC103034594,LOC105897688,LOC103367324,LOC101477563,LOC105894037 coding downstream 57135 11265700 ~ 11276621 (-)
kmt5c LOC107729507,LOC107583067,LOC107732880,LOC107674147,LOC107563992,LOC107658443 coding downstream 70509 11249646 ~ 11263247 (-)
armc5 LOC107729522,LOC107658447,LOC107583055,LOC107732875,LOC107563998,LOC107674164 coding upstream 583 11336383 ~ 11344017 (-)
LOC122331276 LOC107729439,LOC107583059,LOC107658429,LOC107732876,LOC107564000 coding upstream 10926 11346726 ~ 11352796 (-)
elob tceb2,LOC107564001,LOC108280902,LOC103036770,LOC108427344,LOC105012960 coding upstream 17008 11352808 ~ 11355312 (-)
zgc:153292 zgc:153292,LOC107729440,LOC107658430,LOC107583057 coding upstream 20074 11355874 ~ 11361915 (-)
arl6ip1 arl6ip1,LOC107658451,LOC107674170,LOC107732869 coding upstream 34268 11370068 ~ 11375369 (-)
G19019 LOC107561356,LOC107680886,LOC107732897,LOC107551139,LOC107729558,LOC108434911,LOC107687643 non-coding downstream 564358 10767300 ~ 10769398 (-)
G18795 LOC107732905,LOC107729518,LOC107551141,LOC107551149,LOC107690331,LOC107680850,LOC107561346 non-coding downstream 636217 10689164 ~ 10697539 (-)
LOC122334019 NA non-coding downstream 638252 10689419 ~ 10695504 (-)
G18771 NA non-coding downstream 655176 10677457 ~ 10678580 (-)
G18745 NA non-coding downstream 754616 10574167 ~ 10579140 (-)
G19117 NA non-coding upstream 74535 11410335 ~ 11410716 (-)
G19375 NA non-coding upstream 433922 11769722 ~ 11771648 (-)
G19381 NA non-coding upstream 508214 11844014 ~ 11844199 (-)
G19385 NA non-coding upstream 531207 11867007 ~ 11871906 (-)
LOC122330904 NA non-coding upstream 632794 11968594 ~ 11975569 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other downstream 269158 11011936 ~ 11064598 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other downstream 937415 10394314 ~ 10396341 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other downstream 1123140 9993833 ~ 10210616 (-)
G18433 LOC107670519,LOC107563315 other downstream 1870851 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 2195667 9134043 ~ 9138089 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 76185 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 358472 11694272 ~ 11714719 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other upstream 377020 11712820 ~ 11728001 (-)
G19383 NA other upstream 517948 11853748 ~ 11880959 (-)
LOC122341756 NA other upstream 573975 11909775 ~ 11920767 (-)

Expression


Co-expression Network