G19208


Basic Information

Item Value
gene id G19208
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11967648 ~ 11974006 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU28622
CACGTATGAAACGAACCAAAATCTCACATAAAGTAAACCTTGATTGAAAAAAGACcgaaataaacacattaataattattcacaaCAGACTTTTTGCCACATTTGACGTCACAATTTGGGCATCACCTCAATTAGGGAACTTCTTCACCTGgttctgtcaaataaaaataaaaaattctgattCTAAGTAGAATttctaaaatattctttattttattctaaaattatAGATATCTTTAAGGGTTTCATCAACTCAAACTCCAATCCCAAACCCCCCAGTGGTTCTCCAACCTAATTTTGGCAAATGCAGTGTTTCCCACTCCACTGCTCTgataaaggtttaaaaatatattgagatTGTGGCATGACGATCTGATCACATTTGAGCAGTGATTCATGGAGACATCACCCGAAATGTTCTCTGCTTATGCAAGCGGTAAAATTGGTGTGACAAGACTTTGCATTGATAATTAGCTTGAATTTCTTGTTTTGTGCTCTTTTAAATCACAACAAACCGGCATGTGTGAGCCAAACCCCGGGGATTCTTCACACTTCTAGGTTTGCTATTAGACCAGCTCATGAAAGAGCCTGAGATctgattgattgactgactgATGAGATAAGTGCATTTGGGGATTTGAGAGGTTGTATTTGTGTGCCTCTTAATGAGTCAAAGTGAGGAGTTTAGAGTATTAGTGACATTGGAAAGCTTAATCTCCTACAGTAGTTCACCTAAACCCATTACAGAAGCCTACATAATCCTTGCCTACAGTCCACTTCGCTGCATACACCTTAAAGTTTTGGACTTGCATCTAAAAAACCAAAGGGACCCATTACAAGTCCCTTTTGCAAGACAGGATCTGCTAAGAAAATTAATGAATGCCGTATTGAAGGCGATTTCGTAACCTAAAACAGTGTCGAACAAATTCACTTACAAATatcaaaccattttttaaatctttattccATTTTGAAAGCATCTGAGACACATTTACATTAACTCTCAAACTGTCTACAGATCTGATCAATACAATCAGCCACAAAGAAGAAGGGGAGGTTGGAGGAATCCATTTAAGTTTCACGGGGGGGTAGAGAAGGAAAGAGACACTAATATGGTCTCCGTTGCCAAACCCCAAACCTCATCATTTAGTCCAGTGCCATGAGCTGCAGGGAATGCTGGGAAGGTGGAGGACTCAGTGCAGTAAAACTTTTCCTGCATGTTGAGCTCCTCATGACGCCTCAGCATTGCTCTTCACACAGGCAGCAAACGCCTCCATCAGCTCCTTGCACGCTTCCTCGCCACTCTCCTTTACACTTGTCTAGGTCGGTCTTGATGGCCACACAGGGTGCTGGGACAGGGGTCTCGGCAGGAGCTGCAGTCTCTGAGTCCGACATGGTTCTGTGGCGTTGGTGTGATCCGTGCGCTCCTTGCATTCAGACACAGAAAAGCTGCACTACTTCTCGTGTTATGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28622 True 1474 lncRNA 0.41 4 11967648 11974006

Neighbor

gene id symbol gene type direction distance location
LOC122336110 LOC107583028,LOC107658478,LOC107583029,LOC107729487,LOC107729488,LOC107658480 coding upstream 82649 11878905 ~ 11884999 (+)
LOC122336152 LOC107583029,LOC107729488,LOC107583028,LOC107658478,LOC107658479,LOC107729487 coding upstream 86761 11857788 ~ 11880887 (+)
LOC122336178 LOC107583028,LOC107729487,LOC107658478,LOC107583029,LOC107729488,LOC107658479 coding upstream 91090 11857771 ~ 11876558 (+)
LOC122336136 LOC107693507,LOC107729487,LOC107548335,LOC107730746,LOC107730763,LOC107693508,LOC107583028 coding upstream 100170 11866054 ~ 11867478 (+)
LOC122336094 LOC107583028,LOC107658478,LOC107729487,LOC107693507,LOC107583029,LOC107658480,LOC107548335,LOC107730746 coding upstream 104719 11861776 ~ 11862929 (+)
prl LOC107730739,LOC107554085,LOC107689711,LOC107658486 coding downstream 2882 11976888 ~ 11979058 (+)
LOC122329533 NA coding downstream 5757 11979763 ~ 11982000 (+)
LOC122333296 NA coding downstream 10540 11984546 ~ 11986105 (+)
ap2a1 ap2a1,LOC107730730,LOC107554102,LOC107729492,LOC107658487,LOC107583017 coding downstream 21089 11995095 ~ 12013540 (+)
si:ch211-195b15.8 LOC107658488,LOC107729553,LOC107689670,LOC107554105,LOC107730733,LOC107583083 coding downstream 40999 12015005 ~ 12018012 (+)
LOC122338225 NA non-coding upstream 132395 11834772 ~ 11835253 (+)
G19184 NA non-coding upstream 248069 11712609 ~ 11719579 (+)
G19126 NA non-coding upstream 526310 11440506 ~ 11441338 (+)
G19123 NA non-coding upstream 530451 11436944 ~ 11437197 (+)
G18946 smg1,LOC107729485,LOC107583093,LOC107658410,LOC107732845 non-coding upstream 586858 11380273 ~ 11380790 (+)
G19255 NA non-coding downstream 98713 12072719 ~ 12073073 (+)
G19257 NA non-coding downstream 100225 12074231 ~ 12074503 (+)
G19263 NA non-coding downstream 144532 12118538 ~ 12118775 (+)
G19274 NA non-coding downstream 158623 12132629 ~ 12134957 (+)
G19287 NA non-coding downstream 253929 12227935 ~ 12228520 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 73992 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 133724 11773200 ~ 11833924 (+)
G18949 NA other upstream 597896 11368893 ~ 11369752 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other upstream 631823 11333741 ~ 11335825 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other upstream 1125141 10752759 ~ 10842507 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other downstream 53143 12027149 ~ 12049422 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other downstream 118597 12092603 ~ 12100852 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other downstream 140042 12114048 ~ 12117939 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 258421 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 329358 12303364 ~ 12315046 (+)

Expression


Co-expression Network