G19274


Basic Information

Item Value
gene id G19274
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12132629 ~ 12134957 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU28710
ttgccATCATTAATATTCTATgccataatttttttatgctcacaGTAAACAAAAGTTTCTTTCTCAGAATGTAAGTCTTAAAATCTTTAGCTGTTGTTTTTTGACATCAACATTGTGCcataatcaattaatcaattaaatttaatttaattcactgTCAATAAGCTAATTTCTGTAGCAACTGTATCTTTAGATAAAGGATAAAGACTATACATTATAGCAAACACTGGAAATGGATGAATGATGATGTTTAATTAATACAGCCATTATCTCATCTTAAAAGTGAGGTCACATTGTTTGACAAATTTTCATTGGTGAAATCCATATTTTCAATAGCAATCCATACAGTCTGCAAATTTACATAAGGGGTTAAAGCTTTCCCCACAAACATTTTCCAATGGGTTCAATTGGTCATATGAATTGGCCATTTTGCTGTGTGGTTTCAAAATGAATTTCTTTATAAACTGTGATTCACACATCAGTACACTATTGacaataattactatttttgcCAGGAAAATTTGGCAGAACTTTTGCTAATATGACcccactttaaaatataaaacaactgtGGAAAATGAGTATCAATTTTAGAACATTATTCAAAACTGCACCATTGTTAATAATGAACTGCTATAGTCAAATAACATATACAAAACCTATTACTTAGTCCTTGTTTATAGGATAAATTACGTAATCAAGTCATTCCAATGAATTCCTTAATGTTCATTTAGTCAACAGAAGACTTTTAGACAGCTGTGGTGAGACAGAACGTTTCTCCTCCGTTCATGCCCTTCTCTTcacttttttcctttcctttctgtCCCTCACTCTCCTCCGGTGTTGTTTCAGGCTTGCCTTCATTCACATCCTCATCTATATAAAGCAGAGGCTCCTGCTCCTCCCATTTCTTAGCCTCCTTGGTACCGTCCCCACCCACTCCACCGTTAGACTCTTCTCCTGCATCCAGAGCAACGAATGTGCTGAGCACCATATCGTCTCCATCTGGTTTCCCATTATTAGGCAGAAAACCCTCCTGTACCTCACCGTCACATTCAAGCCCCGCCCACGCATCATCCTccatcccttttttctttttggaccGTTTACTTTGTCCATTCATATACATGGGGCTGAAATTCcttgctgtgtttttctttcgCCGCTGGGCGAACAAAATCGCACCTACACACAGCGAGAATATAATGGCCacaaatactattattattaatagccaGTTGTTTTTGAAAGGCATAGTACTTTCCCCAATAATCATGGTGGGTGTCGTGGTGAAAAGGGTGGAGACTGACTCTGATTCTGGGTAATTAGCAGTGTTTTCAGGGAACAGTGTAGTTGATGTTGATGTAGTGGAGCTCTCAGTGATGGTGTCCACAGGGTCCGACATCGAAATGATGGACGTAGACTCAGTCTCGTCTGCAGGTGGTGTGGTTAGGATGGATGTGGGATGGAGGGCTTCTGTTGATTCAGTGGTCATGGCATCAGCTGCTGTGATTTCATCTGTAGGACCTTCAGTGGGACTGGTTGGCTCAGGTGAAGTGAAGCTAACAGTCGTTTCATGCTGAATAGTGCTTGGGGCACCTAGAGTAATCACTGTTGTCTCCACATTAACAGGCAGCAGGTAGGTGCTCACTGTGATCGGCTCAGTTTGCCCAGGTGTTGTTTCAGGAACAGATTCTAGTGATGTTAGTTCAACCTCAGTGATCGATGGTGGAGTACTCCCCCCTGTTGTTTCCTCAGACatggtgtttattttattaatagctGTGGTTTCAGTATTATGCAGATCTGTCTGTAGAGTAGCTGTATTTTCAGATGTGGCACTTAGGATTTCAGAACTCAACGTTGGCtccacaatgtttttattttgtaacgtGATGGTGATGTTTtcgtctgtctctgtctctgtcgtTGTCTCTTGCGCATCAGTGGACTTGAAACAGGGTCCAAGAGCAAGATACAGAAGCAAGTTACCCAAAATGAGCTTCATGATGAAAATACTGGCTAAAAAAGTCTCTCAGTTTAGAAGCTTCTTATAGCGATTTAAATATTCAGGCAACCTGGGTGAGCTGATATTGTGGTTGGAGATCCACTTTTAAACCTCGCGAACGTGTTTAGAAGCTCTTGACTATACGTTAGATGGAAGCAGTTGTTAGAAGAAATTCATGTTTTGTGCTCGCTCTCTGCGAGGTTGATGTTTTATAGAGGTAATGTTGTGTTGGGCCGGAAAGTTTTACACAGACCAGTAgcttcctctttctcctctctcagTGTAATATGGACGATTTCA

Function

GO:

id name namespace
GO:0030099 myeloid cell differentiation biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28710 True 2308 lncRNA 0.36 2 12132629 12134957

Neighbor

gene id symbol gene type direction distance location
bcl2l12 LOC107689657,LOC107658496,LOC107554114,LOC107583005,LOC107729416 coding upstream 5523 12120674 ~ 12127106 (+)
LOC122342107 nosip,LOC107583007,LOC107658495,LOC107729514,LOC107730754,LOC107554107 coding upstream 29697 12098906 ~ 12102932 (+)
trpm4a trpm4a,LOC107730751,LOC107689664,LOC107554101,LOC107729419,LOC107583009 coding upstream 42424 12075141 ~ 12090205 (+)
scaf1 LOC107729496,LOC107658492,LOC107583012,LOC107730764,LOC107554099 coding upstream 60479 12062091 ~ 12072150 (+)
LOC122342085 LOC107729420,LOC107730741,LOC107554113,LOC107689667 coding upstream 71099 12060131 ~ 12061530 (+)
unc119.2 LOC107658437,LOC107689658,LOC107730769,LOC107583101,LOC107729484 coding downstream 6344 12141301 ~ 12143887 (+)
mmp25a LOC107730750,LOC107689654,LOC107729415,LOC107658423,LOC107554116 coding downstream 10154 12145111 ~ 12149131 (+)
srrm2 LOC107729482,LOC107583001,LOC107554117,LOC107689653,LOC107730748 coding downstream 14840 12149797 ~ 12158601 (+)
thoc6 thoc6,LOC107729483,LOC107583000,LOC107689651,LOC107730738 coding downstream 24225 12159182 ~ 12162641 (+)
si:dkey-16l2.16 si:dkey-16l2.16,LOC107729502,LOC107554119,LOC107658507,LOC107730777,LOC108427354,LOC108280555 coding downstream 28653 12163610 ~ 12168731 (+)
G19263 NA non-coding upstream 13854 12118538 ~ 12118775 (+)
G19257 NA non-coding upstream 58126 12074231 ~ 12074503 (+)
G19255 NA non-coding upstream 59556 12072719 ~ 12073073 (+)
G19208 NA non-coding upstream 158623 11967648 ~ 11974006 (+)
LOC122338225 NA non-coding upstream 297376 11834772 ~ 11835253 (+)
G19287 NA non-coding downstream 92978 12227935 ~ 12228520 (+)
G19579 NA non-coding downstream 546301 12681258 ~ 12681565 (+)
G19575 LOC107690704 non-coding downstream 547861 12682818 ~ 12686371 (+)
G19656 NA non-coding downstream 862260 12997217 ~ 13056733 (+)
G19629 ighv4-5 non-coding downstream 870853 13005810 ~ 13096854 (+)
pax10 pax10,LOC107554109,LOC107658497,LOC107730756 other upstream 14690 12114048 ~ 12117939 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other upstream 31777 12092603 ~ 12100852 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other upstream 83207 12027149 ~ 12049422 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other upstream 238973 11885655 ~ 11893656 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other upstream 298705 11773200 ~ 11833924 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other downstream 97470 12232427 ~ 12249997 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other downstream 168407 12303364 ~ 12315046 (+)
G19326 NA other downstream 376969 12511926 ~ 12513721 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other downstream 384880 12519837 ~ 12528803 (+)
LOC122332158 LOC107583070,LOC107737766 other downstream 700424 12835381 ~ 12987913 (+)

Expression


Co-expression Network