G19385


Basic Information

Item Value
gene id G19385
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11867007 ~ 11871906 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU28877
tccaatttaaatgtttattaatcaaATTCACCAGGTTAAGGCCGATTTGTGTACATTTAACAGGAGAGCCATGGcttgattataaaaaaatacaattgtgtCAACTTTACTTGATTTAAACCTTCcatctgtttaaaatgtacatttcttcaTAAGCTGTGTGAGTAAAGTATAATCTgctcttaaaaaatatatatttaaaagcattaagcACACTTGGAGAATGCAAATGACATGAGGGCTGCATTTAGCTGCTGCCTCCATCCAGGGTGTGCTTGTCAAACAGGTACTCGGCCATCCTGTTGTTTCCAGCATCCATCTTGGTAAGGTTGGTGATGTGGTCTCCAAGTTTCTTGATGGCCTCAACCTGCTCATCCAGGAAGTGAGTCTCCAGGAAGTCACACAGCTGTTGGCCGAGACGTCAGAACAGAATGTGAGAAAATACATTCAACTACCCAAAATGGATGTCACTACTTTACAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28877 True 483 lncRNA 0.39 2 11867007 11871906

Neighbor

gene id symbol gene type direction distance location
baxb LOC107729453,LOC107658432,LOC107729452,LOC107548291,LOC107693506,LOC107730775,LOC107548334 coding downstream 23397 11837643 ~ 11843610 (-)
LOC122338209 NA coding downstream 30312 11834377 ~ 11836695 (-)
rnf113a rnf113a,LOC107693494,LOC107658472,LOC107729443 coding downstream 113427 11750228 ~ 11753580 (-)
ddx42 ddx42,LOC107583038,LOC107658468,LOC107729497,LOC107730759,LOC107693495,LOC107548322 coding downstream 127293 11731993 ~ 11739714 (-)
LOC122330909 gfap,LOC107729544,LOC107721967,LOC107658466 coding downstream 178888 11681350 ~ 11688119 (-)
tnnt1 tnnt1,LOC107583024,LOC107729530 coding upstream 21489 11893395 ~ 11900727 (-)
pih1d1 LOC107583023,LOC107658482,LOC107729529,LOC107730744,LOC107548339 coding upstream 29223 11901129 ~ 11907793 (-)
cpt1a2b cpt1cb,LOC107730771,LOC107689673,LOC107548342,LOC106600940 coding upstream 52463 11924369 ~ 11948555 (-)
brsk1b LOC107658484,LOC107548343,LOC108427376,LOC108274928 coding upstream 77204 11949110 ~ 11965948 (-)
prmt1 prmt1,LOC107729532,LOC107658485,LOC107689671 coding upstream 117196 11989102 ~ 11993163 (-)
G19381 NA non-coding downstream 22808 11844014 ~ 11844199 (-)
G19375 NA non-coding downstream 95359 11769722 ~ 11771648 (-)
G19117 NA non-coding downstream 456291 11410335 ~ 11410716 (-)
G19108 NA non-coding downstream 531207 11333756 ~ 11335800 (-)
G19019 LOC107561356,LOC107680886,LOC107732897,LOC107551139,LOC107729558,LOC108434911,LOC107687643 non-coding downstream 1097609 10767300 ~ 10769398 (-)
LOC122330904 NA non-coding upstream 96688 11968594 ~ 11975569 (-)
G19422 NA non-coding upstream 147677 12019583 ~ 12023427 (-)
G19427 NA non-coding upstream 154458 12026364 ~ 12026940 (-)
G19436 NA non-coding upstream 172743 12044649 ~ 12045400 (-)
G19453 LOC107583009,LOC107729419,LOC107658421,LOC107730751,LOC107554101,LOC107689664 non-coding upstream 213423 12085329 ~ 12086221 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 139006 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 152288 11694272 ~ 11714719 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other downstream 437828 11411985 ~ 11429179 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other downstream 802409 11011936 ~ 11064598 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other downstream 1470666 10394314 ~ 10396341 (-)
LOC122341756 NA other upstream 37869 11909775 ~ 11920767 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other upstream 467281 12339187 ~ 12343872 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 750877 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 810084 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 1134090 13005996 ~ 13068190 (-)

Expression


Co-expression Network