G19436


Basic Information

Item Value
gene id G19436
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12044649 ~ 12045400 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU28954
ctcacTTTCCCAAACCGAAGCTACACTCAATGCTGCTGCTGACAGCTTGGCATACGATCTCAAAACCCCACACACACAGTATActgcatacatacacacctTCATCCTCACTGGGCGGGTCAGGGGAGGAGTCTGAATCAGATGAGGAGGGCATTTCTTTAAGCCACTTCTTCCTCTTTTTAGGTGGAGGTTCTGCCTTTACTTTGACGGGTCTGCTCCTCGTCCTGTCAACCCTCTTCTCTCCTGCCCTCTTCTCCTCTTTGACCCTCCCGCGCTCCACAACTGCTGTTCTCCTCTCCAGCTTCTCTTGAGTTTGTCGCTCTTGGAgcttcttttccttttctcgctctttctccctctccttctctcgttgtttttccctttccctttctttttgtttctccctctctttttgcttttcaagttctctctccctttccttctctttctccttttctctcctAGATTTCTCTATCTGCTCCCTCTCTCGTTCAcgctccctctctttttccctttctctctctttctccttttctttttccctttgtTCCCGTTGCTCTTTCTCCCGttgtcgctctctctctttctcccgaTCCTCTCGTTCCATGCGAGGTGGAGTCAAGCTACGGACAGGTTGTGGCTTTGGAAGTGACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28954 True 656 lncRNA 0.49 2 12044649 12045400

Neighbor

gene id symbol gene type direction distance location
prmt1 prmt1,LOC107729532,LOC107658485,LOC107689671 coding downstream 51486 11989102 ~ 11993163 (-)
brsk1b LOC107658484,LOC107548343,LOC108427376,LOC108274928 coding downstream 78701 11949110 ~ 11965948 (-)
cpt1a2b cpt1cb,LOC107730771,LOC107689673,LOC107548342,LOC106600940 coding downstream 96094 11924369 ~ 11948555 (-)
pih1d1 LOC107583023,LOC107658482,LOC107729529,LOC107730744,LOC107548339 coding downstream 136856 11901129 ~ 11907793 (-)
tnnt1 tnnt1,LOC107583024,LOC107729530 coding downstream 143922 11893395 ~ 11900727 (-)
si:ch211-195b15.7 si:ch211-195b15.7,LOC107658491,LOC107689666,LOC107554103,LOC107730731 coding upstream 4057 12049457 ~ 12059549 (-)
rcn3 rcn3,LOC107729515,LOC107730752,LOC107689660,LOC107583008,LOC107554106 coding upstream 57542 12102942 ~ 12106684 (-)
tspan4b tspan4b,LOC107729542,LOC107658498,LOC107554115,LOC107730770,LOC108427360,LOC107583081 coding upstream 81610 12127010 ~ 12131799 (-)
si:ch73-248e21.7 NA coding upstream 87196 12132596 ~ 12136213 (-)
si:ch73-248e21.5 NA coding upstream 91318 12136718 ~ 12140766 (-)
G19427 NA non-coding downstream 17709 12026364 ~ 12026940 (-)
G19422 NA non-coding downstream 21222 12019583 ~ 12023427 (-)
LOC122330904 NA non-coding downstream 69080 11968594 ~ 11975569 (-)
G19385 NA non-coding downstream 172743 11867007 ~ 11871906 (-)
G19381 NA non-coding downstream 200450 11844014 ~ 11844199 (-)
G19453 LOC107583009,LOC107729419,LOC107658421,LOC107730751,LOC107554101,LOC107689664 non-coding upstream 39929 12085329 ~ 12086221 (-)
G19463 NA non-coding upstream 47499 12092899 ~ 12097362 (-)
G19503 NA non-coding upstream 136858 12182258 ~ 12182484 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding upstream 181175 12226575 ~ 12230379 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding upstream 220445 12265845 ~ 12270936 (-)
LOC122341756 NA other downstream 123882 11909775 ~ 11920767 (-)
G19383 NA other downstream 163690 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 316648 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 329930 11694272 ~ 11714719 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other downstream 615470 11411985 ~ 11429179 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other upstream 293787 12339187 ~ 12343872 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other upstream 577383 12622783 ~ 12679800 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 636590 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 960596 13005996 ~ 13068190 (-)
G19700 NA other upstream 1001641 13047041 ~ 13047494 (-)

Expression


Co-expression Network