G19606 (LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775)


Basic Information

Item Value
gene id G19606
gene name LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12622783 ~ 12679800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29176
TTTGAACAAAatgcgtcacacacacacacacacacagaaagtatacggtttagaatattttattgtacaaaagTGAGGTAGATTTACATCATAGCATCGCGATGTCTCTCTGTTTTTAGTAGCTTATGTCACGTTGAGCTGCTGGAAAATCCCTGGTCGTTACCTGACTGACCGGCTACAATGGTTTGCTTTGAGGTGGTCTGTTACATTTGGACCAGTAAGTAAGTTTCACAACAGCTTAAGGATTTTCCAGCAAAAAGCCCACAAAAAAATCCCAGTCAGCGTAAAGACCGGACAATCCTGACAGCACCTTAGACGAATACAGTCCgaaccacacacacagaacaaccAGAAACCATTCTcggtcaataaataaatagtcaatAATGTTCAATGTTGAATATCCGTGGAAGTTCTCCCAGTCACACCTCTTGTAGAAGTAATAGTACCGCGTCACGCCATGAGTCAAGAGAAACACGGTGGTTTGAACGAGCACCATTAGTCACAAATTTCAAACGACCCTCTCTCCGATGAGTAATCAGCTGTCACATTGTTCCACTGTGAGCAATCACTCACAGACTCCTTCTCCACGTCGGCCAAGTGCCCTGAATGCTCCAGGAGGAACTCGGCGGCAGATACGCGCCACGGTTCACTTCCCTCAGTAGTGCGCAAAGTTCACTCTACTGTCCCTGCGTTGTGCCATTGCTCTTATAGTCTTTTTCAAAACGTGACGATAGTTCTTGGCATAGGCACAAGTGACAGCGAGTCCAGCGCCCTGCCGCAGTTAGCGGAGTTACTCTGGGTCGCCTGAAGAATTCCTCTGACCTCCACGAACTCCAGTTTGGCTTTTTTGCACGGCAGAAAGTCGGGGTCAGTGGCTGTTTTGCTCCGTCGCTTTCTAGAGTGACGGTCCGTTCCGGCTGGGTTGCAGTTCTCTTTGTCCACCGCGAGTCCTGCGGGGTCGTGTAGATGCGAATGACCCTCGAGTCCGGACTTCTGCTCGTCCTCGGTAGCCTGCGTCTCAGTCGAGCGCAGAGGTGCAGTCGTGGAGCTCGTTGTGTCCATGGGCTCTTCTGCTTGTGCTGCGCTCTCTGTGACACCGTGCGTGTCAAATTGCCCGTTTTTATCGCTCGTCAGCCGGGCAGAGTGGTAGATATCTCTTGCAGATTTCATGACGAGCGTCAACAGCAGGCTCCGGTGGAGACGGAGTCCACCGCGCTGCGTGCGCGAGCTGTACATTTTACTCAACGCCTGGACCATAATCTGCTTGGCCTCTGCTGTGACATCCATTGTTCTTAGTTGTTAAGTTAACTTTTGAGAATATACAAACactgtttaggttttttttcccctgagcTCAGTCCACTTTCACAGTCGTTTCATTCACCGAAggTAACTTAA

Function

NR:

description
PREDICTED: immediate early response gene 2 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29176 True 1401 TUCP 0.49 2 12622783 12679800

Neighbor

gene id symbol gene type direction distance location
sgsm3 sgsm3,LOC107737740,LOC107695086,LOC107758493,LOC107689630 coding downstream 78302 12530109 ~ 12544481 (-)
si:dkey-283b1.7 si:dkey-283b1.7,LOC107758487,LOC107695187,LOC107689703,LOC107554098,LOC107737768 coding downstream 100996 12515150 ~ 12521787 (-)
rpl23 rpl23,RPL23,rl23 coding downstream 107988 12512603 ~ 12514795 (-)
ccdc103 LOC107758482,LOC107583073,LOC107695153 coding downstream 110318 12510609 ~ 12512465 (-)
LOC122342135 LOC107695140,LOC107758481,LOC107583074 coding downstream 112276 12509191 ~ 12510507 (-)
LOC122332086 gtf2f1,LOC107737737 coding upstream 294908 12974708 ~ 12980093 (-)
LOC122331923 NA coding upstream 301287 12981087 ~ 12987204 (-)
LOC122331939 NA coding upstream 307550 12987350 ~ 12992329 (-)
LOC122332129 NA coding upstream 370486 13050286 ~ 13050861 (-)
LOC122332149 NA coding upstream 403409 13083209 ~ 13083734 (-)
LOC122332655 NA non-coding downstream 327360 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 351847 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 392404 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 440299 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 525421 12092899 ~ 12097362 (-)
G19677 LOC107737766 non-coding upstream 184510 12864310 ~ 12886954 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 220981 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 392760 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 400270 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 410871 13090671 ~ 13091152 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 278911 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 702016 11909775 ~ 11920767 (-)
G19383 NA other downstream 741824 11853748 ~ 11880959 (-)
limd2 limd2,LOC107674139,LOC107658411,LOC107721965 other downstream 894782 11712820 ~ 11728001 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other downstream 908064 11694272 ~ 11714719 (-)
cacna1aa LOC107690704,LOC107571502 other upstream 2190 12681990 ~ 12763090 (-)
G19676 LOC107690708 other upstream 326196 13005996 ~ 13068190 (-)
G19700 NA other upstream 367241 13047041 ~ 13047494 (-)
gng13b NA other upstream 1106209 13786009 ~ 13792602 (-)
G19933 NA other upstream 1125568 13805368 ~ 13805978 (-)

Expression


Co-expression Network