si:dkey-204f11.64 (LOC105898698)


Basic Information

Item Value
gene id si:dkey-204f11.64
gene name LOC105898698
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13112477 ~ 13114856 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29256
AGTCTCGTCTCAACATTGTTACGAACTTTCTCGATCTGTCAGGAGTCATGTCGAATAACAGCGCCGGCGGTCTGGTCAGCCTGCAAAAAAGCGTCAAGCAGCTGCGATTTGAAGCAGGAATCCGCAGAATCAAGGTTTCTCAAGCTGCGGCAGAGCTGAAAGCATTTTGCATGCAAAATGCCCACAAGGACCCTCTCCTCATGGGAGTCCCATCAAGCGACAACCCCTTTCGGCCCCCCAAATCATGTGCGCTCTTCTGAGGAGCGGTGAAGAACACGGAGAAACTTCTGAACATTCCTCTTTCACTCAAACGTTTTCACTACACAACCTTCAGACCCCCTTTACATTACAGCGGAGCTGGTCATCACCGTTACCGTTACGCTACATCGTTCCATTTGTAAGCTGCGTTTGTGACTTGAAGTCTTTCACGTTCAGTGACGTGAGTTATGAAGAAAACCTGTGAGAAgtgattttaaaagtgtttgcaTATTGTTAAATAAGGGCATCGTAGAGCGAAGTTAAACTAGCAGGAAAGAATTCAAGCGTTTAGTTGGTACACTGAAAAAATTGACAAATTTgcagaaatattatattatcttttttttttttttttgctgtgtagcGAAGTCCGTTTGAATACCAGccttacacaaaaaaaaacctgcaaaatGCTTTCTTGTCGTAATATGTTTTAGTTTAGGAAGAAACGcagaattaatttgtttattgatGCAATTAGGCTTACATACATAGACTTGTGTTGCCACGAAACTTTAATTGTATTAACCACATAGCTCTATTGAAGGAGAGAGATGTCTTGAATCTCAGGTTCTTTTTGTTGAAGATCGATGCTGTGTTTCTGATATAAATTCACTGTTCTGAATACTGAATGAATGAGGTACTACTTTTTATTCGGATGCATTTTCCCTAATCTTGTGAGGTTTCTGCATAACTCTGACATTTCCTAAATGTTCTAGTGTTAACACTCGAGTGCAGAGTTTTAGTAATATTTGCTGGTGAAAGGGTGCTGCCTACCTGTTACGCTTTTACTCTAAGAATTTGAACACCAAATGACCGTGAGCGTACCAGCTGGCCTGTTTTTGCATATACTCTCGGCTTACTGATCTCATCTTATACCTGTACTGTATCTTCATCAGTCAACCACTAGACGTTCatgcaaatgtcatttttactgCTGTCACTGCATTGTTaactttttcagtctgtttacCTCGTGTATGTCTTGCATTTTAAGATTGAACGTGCCTAGGAGAGCAACGTCTGATTTATTTGAGAGACGCCAATATAATTTTCCTTATTAAACTGAATCAAGATGTTGTCGGTAAATAAGGTGCcattgataaataaattaaaatgactgagCCT
>XM_043234628.1
TTTCGACTACAGGGGCGCAATTGAGCCGGTTGCAGCCGAAGTCAGTCTCGTCTCAACATTGTTACGAACTTTCTCGATCTGTCAGGAGTCATGTCGAATAACAGCGCCGGCGGTCTGGTCAGCCTGCAAAAAAGCGTCAAGCAGCTGCGATTTGAAGCAGGAATCCGCAGAATCAAGGTTTCTCAAGCTGCGGCAGAGCTGAAAGCATTTTGCATGCAAAATGCCCACAAGGACCCTCTCCTCATGGGAGTCCCATCAAGCGACAACCCCTTTCGGCCCCCCAAATCATGTGCGCTCTTCTGAGGAGCGGTGAAGAACACGGAGAAACTTCTGAACATTCCTCTTTCACTCAAACGTTTTCACTACACAACCTTCAGACCCCCTTTACATTACAGCGGAGCTGGTCATCACCGTTACCGTTACGCTACATCGTTCCATTTGTAAGCTGCGTTTGTGACTTGAAGTCTTTCACGTTCAGTGACGTGAGTTATGAAGAAAACCTGTGAGAAgtgattttaaaagtgtttgcaTATTGTTAAATAAGGGCATCGTAGAGCGAAGTTAAACTAGCAGGAAAGAATTCAAGCGTTTAGTTGGTACACTGAAAAAATTGACAAATTTgcagaaatattatattatcttttttttttttttttgctgtgtagcGAAGTCCGTTTGAATACCAGccttacacaaaaaaaaacctgcaaaatGCTTTCTTGTCGTAATATGTTTTAGTTTAGGAAGAAACGcagaattaatttgtttattgatGCAATTAGGCTTACATACATAGACTTGTGTTGCCACGAAACTTTAATTGTATTAACCACATAGCTCTATTGAAGGAGAGAGATGTCTTGAATCTCAGGTTCTTTTTGTTGAAGATCGATGCTGTGTTTCTGATATAAATTCACTGTTCTGAATACTGAATGAATGAGGTACTACTTTTTATTCGGATGCATTTTCCCTAATCTTGTGAGGTTTCTGCATAACTCTGACATTTCCTAAATGTTCTAGTGTTAACACTCGAGTGCAGAGTTTTAGTAATATTTGCTGGTGAAAGGGTGCTGCCTACCTGTTACGCTTTTACTCTAAGAATTTGAACACCAAATGACCGTGAGCGTACCAGCTGGCCTGTTTTTGCATATACTCTCGGCTTACTGATCTCATCTTATACCTGTACTGTATCTTCATCAGTCAACCACTAGACGTTCatgcaaatgtcatttttactgCTGTCACTGCATTGTTaactttttcagtctgtttacCTCGTGTATGTCTTGCATTTTAAGATTGAACGTGCCTAGGAGAGCAACGTCTGATTTATTTGAGAGACGCCAATATAATTTTCCTTATTAAACTGAATCAAGATGTTGTCGGTAAATAAGGTGCcattgataaataaattaaaatgactgagCCTAAAAAAA

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29256 False 1386 lncRNA 0.40 3 13112520 13114849
XM_043234628.1 True 1436 mRNA 0.40 3 13112477 13114856

Neighbor

gene id symbol gene type direction distance location
aldh3b1 aldh3b1,LOC107698763,LOC107601228,LOC108444046,LOC108258475 coding upstream 4630 13103276 ~ 13107847 (+)
LOC122332118 alkbh7,LOC107723204,LOC107690706 coding upstream 137850 12972477 ~ 12974627 (+)
LOC122332168 gtf2f1,LOC107737737 coding upstream 212261 12895326 ~ 12900216 (+)
alkbh7 NA coding upstream 340295 12770572 ~ 12772182 (+)
ier2a LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 coding upstream 432720 12678396 ~ 12679757 (+)
carm1 carm1,LOC107698604,LOC107689626,LOC107753277,LOC107724424 coding downstream 1175 13116031 ~ 13129608 (+)
timm29 zgc:110046,LOC107736790,LOC107601237,LOC107698646,LOC107753167,LOC107689699,LOC107578239 coding downstream 19814 13134670 ~ 13136750 (+)
slc25a23b slc25a23b,LOC107601238,LOC107698653,LOC107724434,LOC107689624,LOC107753149,LOC105898533,LOC108444036 coding downstream 39651 13154507 ~ 13162307 (+)
znf207a znf207a,LOC107590415,LOC107698690,LOC107601239,LOC107689623 coding downstream 49140 13163996 ~ 13170254 (+)
dlx4a dlx4a,LOC107709990,LOC107689696,LOC107590410,LOC107753083,LOC107688148 coding downstream 271572 13386428 ~ 13391506 (+)
G19629 ighv4-5 non-coding upstream 15623 13005810 ~ 13096854 (+)
G19626 NA non-coding upstream 19837 13088254 ~ 13092640 (+)
G19628 LOC107710248 non-coding upstream 30323 13077933 ~ 13082154 (+)
G19624 NA non-coding upstream 35783 13072133 ~ 13076694 (+)
G19636 NA non-coding upstream 39878 13061117 ~ 13072599 (+)
G19711 NA non-coding downstream 5777 13120633 ~ 13214815 (+)
LOC122330830 NA non-coding downstream 25426 13140282 ~ 13152319 (+)
LOC122341519 NA non-coding downstream 57183 13172039 ~ 13173224 (+)
G19722 NA non-coding downstream 111703 13226559 ~ 13227185 (+)
G19757 NA non-coding downstream 229639 13344495 ~ 13351575 (+)
LOC122332158 LOC107583070,LOC107737766 other upstream 124564 12835381 ~ 12987913 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other upstream 583674 12519837 ~ 12528803 (+)
G19326 NA other upstream 598756 12511926 ~ 12513721 (+)
nbr1b LOC107658519,LOC107729513,LOC107689639,LOC107737750,LOC107554134,LOC555713 other upstream 797431 12303364 ~ 12315046 (+)
LOC122341822 LOC107582992,LOC107729455,LOC107554125,LOC107737756,LOC107689687 other upstream 862480 12232427 ~ 12249997 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other downstream 583681 13698537 ~ 13710865 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other downstream 881105 13995961 ~ 14002378 (+)
G19973 NA other downstream 934634 14049490 ~ 14053032 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other downstream 1003611 14118467 ~ 14119570 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other downstream 1005329 14120185 ~ 14123128 (+)

Expression


Co-expression Network