G19672 (alkbh7,LOC107723204,LOC107690706)


Basic Information

Item Value
gene id G19672
gene name alkbh7,LOC107723204,LOC107690706
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12900781 ~ 12902910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29260
CGAATTCAAAATGGCGCCCTGTCAATGACAGTAATGACACTAGTAAGCTGAATATTGTGGATCTTTAAGTGCCATCGTATGTCCTCGACAAAATGACACTGCTAATTAGAGTATCGAAACAAGGACAGAGAAAGCTTTCCATAATCCCTTACTGTATAGGTTTTTATCGGAGAGCACGGATTTACGAAAAGGCCCCGAGAGCAAAGAGGGCTGTAGTTGGTTGTACGGATCGTCGCAGGAAATTTTATCCGTAGTGCGTGGGCATGTTGAAGTTAGACATAATTTCATCAGCGAGGAAGAGGAGAATGCCCTTTTCAAAGAAGTGGAGACAGGACTTAGAAAAAAACGATACGAGTTTGACCACTGGGACGACGCTATTCATGGCTACAGGGAAACAGAGCGGCTGCAGTGGGGACTTAAGTGTGAAAGTATCCTAAAGCGGGTGAGAGAGGTAGCTTTTCCTGAAGGCAGTCCACTGCTTGGGCCAATTCATGTTCTGGACCTGGACAGAGAGGGCTATATCAAACCTCATATCGACAGTGTGAAGTTCTGTGGAAGCACTATTGCAGGACTGAGCCTTTTGTCCGATAGTGTGATGCGATTGGTCCCGGAAAACAAATCCACAGACTGGGTGGACTTGCTTCTGAGTCGGCGCtcactttatatattaaaGGATGACGCTCGATTTAAATTCACCCATGAAATCCTGAAAGAAGAAGAATCCTTTTTCTCAGGACGGAAGGTACCACGGCATCGCCATGCATCTCTGTCATCTGCGAAACCTGCCTGTTTAAAAGAACTGGACTGACCTTAGAACTCGTCTTCTAAAAGCTGTGACTTTTATGAGAATTGTTTATCTTTCAGTTAatcacacacaccaacacacacaaagtaGCTAAAAACTTATAAATCACTTGCATTTTCTCGGAATACCTACAAAGAAACAACTGCTGAAAAACTTTAACATCCCACTGAAATGGTGTGTTGGATTTATGAAAGGCAAAGTTTTGACTGATGCAatgcataatgtaaaataagtcAGGGAAAAGAATGTCTTGACAACacgggtgtcaaactcaattcctgttTAGgaagtttagattcaaccccgctaaaacacatatactgtgtaagtctgaagtacttgattagctggatcaggtgtgtttaaataGGGTTGCATCTCAACTTTGCAGGGCTACGGCCCTCCaggagtttgacacccctgctttA

Function

symbol description
alkbh7 Predicted to be involved in fatty acid metabolic process. Predicted to act upstream of or within cellular response to DNA damage stimulus and regulation of mitochondrial membrane permeability involved in programmed necrotic cell death. Predicted to be active in mitochondrial matrix. Orthologous to human ALKBH7 (alkB homolog 7).

NR:

description
PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29260 True 1233 lncRNA 0.43 4 12900781 12902910

Neighbor

gene id symbol gene type direction distance location
LOC122329559 LOC107582973,LOC107723206,LOC107554143,LOC107695115,LOC107689629,LOC107737739,LOC796777,LOC108436680 coding downstream 238933 12571028 ~ 12661848 (-)
sgsm3 sgsm3,LOC107737740,LOC107695086,LOC107758493,LOC107689630 coding downstream 356300 12530109 ~ 12544481 (-)
si:dkey-283b1.7 si:dkey-283b1.7,LOC107758487,LOC107695187,LOC107689703,LOC107554098,LOC107737768 coding downstream 378994 12515150 ~ 12521787 (-)
rpl23 rpl23,RPL23,rl23 coding downstream 385986 12512603 ~ 12514795 (-)
ccdc103 LOC107758482,LOC107583073,LOC107695153 coding downstream 388316 12510609 ~ 12512465 (-)
LOC122332086 gtf2f1,LOC107737737 coding upstream 71798 12974708 ~ 12980093 (-)
LOC122331923 NA coding upstream 78177 12981087 ~ 12987204 (-)
LOC122331939 NA coding upstream 84440 12987350 ~ 12992329 (-)
LOC122332129 NA coding upstream 147376 13050286 ~ 13050861 (-)
LOC122332149 NA coding upstream 180299 13083209 ~ 13083734 (-)
G19677 LOC107737766 non-coding downstream 13827 12864310 ~ 12886954 (-)
LOC122332655 NA non-coding downstream 605358 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 629845 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 670402 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 718297 12182258 ~ 12182484 (-)
LOC122332187 NA non-coding upstream 169650 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 177160 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 187761 13090671 ~ 13091152 (-)
G19726 NA non-coding upstream 222611 13125521 ~ 13129608 (-)
G19811 NA non-coding upstream 454669 13357579 ~ 13357789 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 137691 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 220981 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 556909 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 980014 11909775 ~ 11920767 (-)
G19383 NA other downstream 1019822 11853748 ~ 11880959 (-)
G19676 LOC107690708 other upstream 103086 13005996 ~ 13068190 (-)
G19700 NA other upstream 144131 13047041 ~ 13047494 (-)
gng13b NA other upstream 883099 13786009 ~ 13792602 (-)
G19933 NA other upstream 902458 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 1300020 14202930 ~ 14204350 (-)

Expression


Co-expression Network