G19677 (LOC107737766)


Basic Information

Item Value
gene id G19677
gene name LOC107737766
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12864310 ~ 12886954 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29337
CCGCCTTGTGCAGGAACTCGCACTTCATTTTCGTATTTTGCTTCTTCCAGTCTGCGGCACTGATTTGCAAAATGCTTGTGGCGCTATATTTGGTTACTGACTCTTTCTTCTCAGTTTTGTCACATGTGTCTATCACATTTGTCACTTCTTTATCATTCAGAGACCACTTAAATGTGTATTCATTAGGCGAAAACCGCTGGGCTAAACACATGAAGGTTGCTGTTTCATTGTCTAACTCCATTTTTGTAGGTTCTGTTAAGAACAGGGTTGCACGCAGATCTGGCGGTGGGGCTTTTGGAGCAAGAGAAGATGCTTTCGCGCCTTGAGAATTTGACGCTTCGCATTGGTAAGGTTTTTTGGGATCCCAATCGCTTTTTCTCACGCGCAGATGGCTGATTTTGGTATAGTCTCCGTCTCTCCCGAACGCCGGATACTGCACGACATCACTCAACGATTTCTTATCAAAATCCGTCCatttgaaagaaagagagtCCGCGGGTGAGAAACCACTCGCCATGCAGCCGATGGTGATAAACccgtctgaatcaggagagcaCTGGGACATGGCGAAGATCGACTTTGGCGGAGACGGTTGAGCTGTGGAGACAGTGCATCGTTCTCAGACTAAATC
>TU29341
AATAGCTAATGTAAAATGTGAACAGATTATTGTAACTTACCTTTTGGAGCAAGAGAAGATGCTTTCGCGCCTTGAGAATTTGACGCTTCGCATTGGTAAGGTTTTTTGGGATCCCAATCGCTTTTTCTCACGCGCAGATGGCTGATTTTGGTATAGTCTCCGTCTCTCCCGAACGCCGGATACTGCACGACATCACTCAACGATTTCTTATCAAAATCCGTCCatttgaaagaaagagagtCCGCGGGTGAGAAACCACTCGCCATGCAGCCGATGGTGATAAACccgtctgaatcaggagagcaCTGGGACATGGCGAAGATCGACTTTGGCGGAGACGGTTGAGCTGTGGAGACAGTGCATCGTTCTCAGACTAAATC
>TU29346
TTAAAACTGATCTCCTTCTtggtttctttattatttttgtcacgGATGGTGCAAGTGACTTTCTCACCCTTAAACCATTTATCTGTATCAACAGTGACATTGTATTTTCTTGTAGACGATGAACTGTAAGTAGAAACAACTTTTTGTTTCTCAACATTCACTGCACATGACATATCTGCTATATCTCCAGAAAAAAACGGCTTCAGCTTCCAGGACaactttatcatttataaatatgtctGTCGGAACTGGTGGTTTCAGTGTGAGTGTAATTGGGGCTGATGATGGGTCTGATGGTGGGGCCGGTGGTGGGGCCGGTGGTGGGGCTGATGATGGGTCTGATGGTGGGGCCGAAGATGGGGCTTTTGGAGCAAGAGAAGATGCTTTCGCGCCTTGAGAATTTGACGCTTCGCATTGGTAAGGTTTTTTGGGATCCCAATCGCTTTTTCTCACGCGCAGATGGCTGATTTTGGTATAGTCTCCGTCTCTCCCGAACGCCGGATACTGCACGACATCACTCAACGATTTCTTATCAAAATCCGTCCatttgaaagaaagagagtCCGCGGGTGAGAAACCACTCGCCATGCAGCCGATGGTGATAAACccgtctgaatcaggagagcaCTGGGACATGGCGAAGATCGACTTTGGCGGAGACGGTTGAGCTGTGGAGACAGTGCATCGTTCTCAGACTAAATC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107737766

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29337 False 631 lncRNA 0.47 2 12864310 12886954
TU29341 False 380 lncRNA 0.47 2 12864310 12886207
TU29346 True 702 lncRNA 0.46 2 12864310 12865162

Neighbor

gene id symbol gene type direction distance location
LOC122329559 LOC107582973,LOC107723206,LOC107554143,LOC107695115,LOC107689629,LOC107737739,LOC796777,LOC108436680 coding downstream 202462 12571028 ~ 12661848 (-)
sgsm3 sgsm3,LOC107737740,LOC107695086,LOC107758493,LOC107689630 coding downstream 319829 12530109 ~ 12544481 (-)
si:dkey-283b1.7 si:dkey-283b1.7,LOC107758487,LOC107695187,LOC107689703,LOC107554098,LOC107737768 coding downstream 342523 12515150 ~ 12521787 (-)
rpl23 rpl23,RPL23,rl23 coding downstream 349515 12512603 ~ 12514795 (-)
ccdc103 LOC107758482,LOC107583073,LOC107695153 coding downstream 351845 12510609 ~ 12512465 (-)
LOC122332086 gtf2f1,LOC107737737 coding upstream 87754 12974708 ~ 12980093 (-)
LOC122331923 NA coding upstream 94133 12981087 ~ 12987204 (-)
LOC122331939 NA coding upstream 100396 12987350 ~ 12992329 (-)
LOC122332129 NA coding upstream 163332 13050286 ~ 13050861 (-)
LOC122332149 NA coding upstream 196255 13083209 ~ 13083734 (-)
LOC122332655 NA non-coding downstream 568887 12294140 ~ 12295423 (-)
LOC122341243 LOC107729463,LOC107658509,LOC107582987 non-coding downstream 593374 12265845 ~ 12270936 (-)
G19518 LOC107729456,LOC107658501,LOC107582995,LOC107554123,LOC107689649,LOC107737759 non-coding downstream 633931 12226575 ~ 12230379 (-)
G19503 NA non-coding downstream 681826 12182258 ~ 12182484 (-)
G19463 NA non-coding downstream 766948 12092899 ~ 12097362 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding upstream 13827 12900781 ~ 12902910 (-)
LOC122332187 NA non-coding upstream 185606 13072560 ~ 13072828 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding upstream 193116 13080070 ~ 13080621 (-)
G19703 ighv6-1 non-coding upstream 203717 13090671 ~ 13091152 (-)
G19726 NA non-coding upstream 238567 13125521 ~ 13129608 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 101220 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 184510 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 520438 12339187 ~ 12343872 (-)
LOC122341756 NA other downstream 943543 11909775 ~ 11920767 (-)
G19383 NA other downstream 983351 11853748 ~ 11880959 (-)
G19676 LOC107690708 other upstream 119042 13005996 ~ 13068190 (-)
G19700 NA other upstream 160087 13047041 ~ 13047494 (-)
gng13b NA other upstream 899055 13786009 ~ 13792602 (-)
G19933 NA other upstream 918414 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 1315976 14202930 ~ 14204350 (-)

Expression


Co-expression Network