G19726


Basic Information

Item Value
gene id G19726
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13125521 ~ 13129608 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29406
TTAGGGACTTCTCCATCAACATTTAATTTGctccttttttttgtctgttgcttttttttgtgaaaaaaaaaaaaaaaaaaaagttaattctaCAAACTAGCAGACATGGTTGTTTTCATCTCATGATCGTTGCTAAATCAAACTGAATTAACCGAAGAAAAAAGGTGACTGGAAGCGGTGCATACGACTTCATAGTCTTTGATGGGGCTATTATCATATCCCCGGtgaaggagaggaggagagagagagagagagagagagagagagaggggggaggAAAATTATAGCTAGTCTGGCATCACTTGATCTCCTCCTTTCCTCAACAGGTCTCAAAACACAGAACTTGACAAGATAAGGGTTCTGGAGGGGGGTGTAAACTAGGATACTGCAATTCCTGCTGCAGTGGTCAGTGCGTGTCCAGTGCGGACCTCACTGTTTATGTCGTTCATCCATCGGTCTTCCTCCCCCCAGTGCAGACTGTCCTTCCCAGCACTCCGCCGTCCTCCTTGCCTGATAAAGGAGGGTTTTGGTGCTGATATTCTTATTCCTAAAACCTCTGTGTCCTTATAATTGACTAACAATGAATCCTCCAAATTTACAAGTCAGATCAGCGCCGATATGGAGTCGGAGGCCGACAGAAGCAGTCTGGATAATCCATGCTCAGAATTCACCTCAGAGAACACCAAGCGACACATAAATCTGGGACTGCactacattaaaacacacagtcACTGGAATGAAAGTAAGACGATCTCTATCTACACTATGGTTGTCTACAGGCAGGATCCAGCGGCGCTGCGCTAGTAGTCGTGATGAGCTTTGTGAGCATGTGTCCGTTTCTTCTGGCCAGCGATGAGAGGTTTGTGAACATGGAGATGGCCCGGCAGAAGCCCATGCTGAGAGAATGGAGATGCGACAGCCGGTCGATCTCACcgaaaacgaaaaaaacaaacaaaaaaaaaaccttgattc

Function

GO:

id name namespace
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0051536 iron-sulfur cluster binding molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function
GO:0051540 metal cluster binding molecular_function
GO:0048037 obsolete cofactor binding molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU29406 True 972 lncRNA 0.45 2 13125521 13129608

Neighbor

gene id symbol gene type direction distance location
LOC122341259 clpp,LOC107753176,LOC107590418,LOC107689627,LOC107724426,LOC107698620,LOC107601229 coding downstream 14142 13107831 ~ 13111379 (-)
LOC122341774 NA coding downstream 24877 13097129 ~ 13100644 (-)
LOC122341304 LOC107710248 coding downstream 32675 13092210 ~ 13092846 (-)
LOC122332140 ighm,ighv5-5,ighv5-4,ighv5-8 coding downstream 38254 13086375 ~ 13087267 (-)
LOC122341303 NA coding downstream 40555 13084026 ~ 13084966 (-)
yipf2 yipf2,LOC107698640,LOC107601236,LOC107689625,LOC107724423 coding upstream 1328 13130936 ~ 13134638 (-)
tnrc6c1 LOC107724432,LOC107590414,LOC107601217,LOC107698663 coding upstream 43743 13173351 ~ 13227138 (-)
sept9a sept9a,LOC107689620,LOC107601241,LOC107724438,LOC107688081 coding upstream 155768 13285376 ~ 13348706 (-)
LOC122342101 NA coding upstream 220370 13349978 ~ 13352450 (-)
LOC122342102 nmrk1,LOC107724440,LOC107601244,LOC107682648 coding upstream 224385 13353993 ~ 13358941 (-)
G19703 ighv6-1 non-coding downstream 34369 13090671 ~ 13091152 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding downstream 44900 13080070 ~ 13080621 (-)
LOC122332187 NA non-coding downstream 52693 13072560 ~ 13072828 (-)
G19672 alkbh7,LOC107723204,LOC107690706 non-coding downstream 222611 12900781 ~ 12902910 (-)
G19677 LOC107737766 non-coding downstream 238567 12864310 ~ 12886954 (-)
G19811 NA non-coding upstream 227971 13357579 ~ 13357789 (-)
G19872 NA non-coding upstream 503951 13633559 ~ 13633785 (-)
G19947 NA non-coding upstream 768023 13897631 ~ 13898932 (-)
LOC122342150 NA non-coding upstream 788092 13917700 ~ 13930277 (-)
G20029 zgc:86896,LOC107654493,LOC107721506,LOC107590453,LOC107719989,LOC107601274 non-coding upstream 929973 14059581 ~ 14060492 (-)
G19676 LOC107690708 other downstream 57331 13005996 ~ 13068190 (-)
G19700 NA other downstream 78027 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 362431 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 445721 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 781649 12339187 ~ 12343872 (-)
gng13b NA other upstream 656401 13786009 ~ 13792602 (-)
G19933 NA other upstream 675760 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 1073322 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 1305539 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 1991198 15120806 ~ 15179359 (-)

Expression


Co-expression Network