G19872


Basic Information

Item Value
gene id G19872
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13633559 ~ 13633785 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29594
TTAGTAAAGCATTTCTTAAGTTTGGGTATTGTGAAGAATAAGGGATGTAGAATAGGCTCAAGCAGaatatatgctatataaatactattaaacAGCCAGTTTGtgaataataggcatgctaataagcaactattcATTAGTAAGAAGTGGTCACTGCACTGATGTGTTTCTTAAATAATTAACACAACACTAAATAACCGGATCTTACGTTGTCGTCGTTTTGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29594 True 227 lncRNA 0.33 1 13633559 13633785

Neighbor

gene id symbol gene type direction distance location
psmd11a psmd11a,LOC107709998,LOC107688086,LOC107601249,LOC108442534,LOC101476208 coding downstream 172744 13454266 ~ 13460815 (-)
nsfa nsfa,LOC107601245,LOC107709994,LOC107689618,LOC107590408,LOC107688085 coding downstream 180072 13435933 ~ 13453487 (-)
thraa thraa,LOC107601247,LOC107709996,LOC107689619,LOC107688087,LOC107753060 coding downstream 221611 13398956 ~ 13411948 (-)
zgc:163143 LOC107724428,LOC107689697,LOC107601243,LOC107688084,LOC107590412 coding downstream 268948 13358939 ~ 13364611 (-)
LOC122342102 nmrk1,LOC107724440,LOC107601244,LOC107682648 coding downstream 274618 13353993 ~ 13358941 (-)
LOC122342172 NA coding upstream 41721 13675506 ~ 13678095 (-)
ndufab1b ndufab1,LOC107601258,LOC107654464,LOC107721527,LOC107580109,LOC107720092,LOC107688150,LOC102794063,LOC107725395 coding upstream 131447 13765232 ~ 13767068 (-)
dctn5 dctn5,LOC107579625,LOC107590401,LOC107719975,LOC105899917 coding upstream 136866 13770651 ~ 13772390 (-)
caskin1 caskin1,LOC107721515,LOC107654476 coding upstream 174522 13808307 ~ 13884781 (-)
suz12a LOC107721513,LOC107601261,LOC107688101,LOC107654477,LOC107719980,LOC107590398 coding upstream 268869 13902654 ~ 13912453 (-)
G19811 NA non-coding downstream 275770 13357579 ~ 13357789 (-)
G19726 NA non-coding downstream 503951 13125521 ~ 13129608 (-)
G19703 ighv6-1 non-coding downstream 542407 13090671 ~ 13091152 (-)
LOC122332138 ighv5-5,ighm,ighv5-4,ighv5-8 non-coding downstream 552938 13080070 ~ 13080621 (-)
LOC122332187 NA non-coding downstream 560731 13072560 ~ 13072828 (-)
G19947 NA non-coding upstream 263846 13897631 ~ 13898932 (-)
LOC122342150 NA non-coding upstream 283915 13917700 ~ 13930277 (-)
G20029 zgc:86896,LOC107654493,LOC107721506,LOC107590453,LOC107719989,LOC107601274 non-coding upstream 425796 14059581 ~ 14060492 (-)
G20095 LOC107719998,LOC107601286,LOC107688145,LOC107590379 non-coding upstream 586300 14220085 ~ 14221797 (-)
G20202 NA non-coding upstream 751576 14385361 ~ 14388398 (-)
G19676 LOC107690708 other downstream 565369 13005996 ~ 13068190 (-)
G19700 NA other downstream 586065 13047041 ~ 13047494 (-)
cacna1aa LOC107690704,LOC107571502 other downstream 870469 12681990 ~ 12763090 (-)
G19606 LOC107583095,LOC107690711,LOC107723203,LOC107571501,LOC107689702,LOC107737775 other downstream 953759 12622783 ~ 12679800 (-)
LOC122342093 LOC107583078,LOC107754431,LOC107583076 other downstream 1289687 12339187 ~ 12343872 (-)
gng13b NA other upstream 152224 13786009 ~ 13792602 (-)
G19933 NA other upstream 171583 13805368 ~ 13805978 (-)
si:dkeyp-72e1.6 si:dkeyp-72e1.6,LOC107721468,LOC108274424,LOC108438007,LOC103040592 other upstream 569145 14202930 ~ 14204350 (-)
mlx mlx,LOC107601295,LOC107721525,LOC107720011,LOC107590371,LOC107688133,LOC107654516 other upstream 801362 14435147 ~ 14439541 (-)
plcd3a plcd3,plcd3a,LOC107591554,LOC107581738,LOC107738025,LOC107654535,LOC107674588,LOC108432051,LOC106607244 other upstream 1487021 15120806 ~ 15179359 (-)

Expression


Co-expression Network