G19963


Basic Information

Item Value
gene id G19963
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 13940616 ~ 13943491 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29717
TATTAATGTACGGAATGCTTAATTGTactgattcttttaaaaaaaagttattctcTTAATATAGAATAATAGAGTAGTTAATAGAAATAGATAATATAATGTAggaaagcaatttaaaaatcgATGCAACATGATTAGCGCCAATAAGATGGAAAACATCAACACCCATAATGCACTGGTGGACCAGGCATAGTTAGTTAACGAGGTTCAGTATTCTGTAGGTCTCTGTACATTGGGAATGATGTTCTCACCTCATCTCTGGAGGCATTGTCTATCTCTGCTGCCAGTGACTGGGCCTTGGTGTGACAAGCGAACAGGTTTTTGGCCTCGTAAAGGCTGAGACTGAGAATCTGTCCGTTCAGATCATCGTTCTGGTCTCTGAGTTTATGGTTTTCTGCTTGAGCCGTTTTACTTCATGCTCCAGTTCAATCTCTCGAGTCTTGGCGTTGTACTCGGACAGTCCTGCAGCGGTACGGCCACGGCCGGGCTTCTCAGTCTCCAGTTTAAAGAGCTGAAGGTGCTCCAGTTCACGCCGCAGGTCCTCTATCAGCTACATGCACGTGTGAATGGTGTGAGAGCTCTGGacatatatgtttgtgtacaaTTGTGACCTGCAATGAAAATGACACTGTGCTACCTCTTGCATGGCCTCTCGCTCCTTCTGAAACTCGTGTCTGTTCTGCCAAAGTTTATCCATCATTTTCCTGTACAGATCCATCTCATCCTTCAAACGCAGGCTTGTGTCTTCCAGTTTATCTGTCATACGCTGCTTCTCCTGTGCACAAATACACATAGTGAGTGACCAAAATCTCTACCATGACACAAGTACTATAACCACTAGAAGGACGTAGTTATTCTGTTTGAAATCATTCTAGTCTCCACattactgatttaaaataaagtcataccCACATATATCTCAACATCCTCACATCAATGACTGCTAAGGAATTTTGTAAAAACTTGGTCTTGTGCCAGAGACACTGTTGCACTACTATATATGTTAGACAAaattatacatacaatatacattgatctaaatgcatgatttattacatttacatttcaatatcACCTTGCCGTAAATCTCTCTATTTAAAGCATTATATTTccctcatcatttactcacccttgctTCCTACATGCATAGTCCATACAATGTCCATTCAGTGCAAGTGAATAGGACCCTCAAAGttgttgcttaaaaaaacagttttcatacctttatttctaaattgTGTATGGATTTAACTTGTCAACTCTGATTCCCATCCACATGCATTTTGTGGCCTCACAgtgattatttttctaaaaatcttcatttgtgttacacaagaaagaaagtcatatacatctaggatTTTAGGTGTAGTACAATTTTAAGGCATTTTAGacaacattattatttcttaaaaagctGCATTGAAACACTGTATTATAAAAAATCTCTTGATTAGCACTAGTCAGTTCACTTGCCAGCCATTTTGGACACAGTGcagctggggttttttttttaggtaggCAATATGCTTACAAGTATGTCTCATCCACttgacttttaaaaacacataaaaacacaactttatatttcatgtttcacTGCACTTCAAATCAGCAATCTGACAACAATTTCACCATAAATTAGCTTCTTTGGCTGATTTGAAACCAAAAGTTGTATTTTCAGCCTAGTCCACAAGAGGACCTTTAATTTTTCAGCTATATCAGACAATGACCTAGTTTTCGTCTTCATGCAAGAGCTACAGCATAGAAAGTCGTGCGGTTGCTCGACGATGTTTCAATCCATCTCAGAGATCAAAGCCTCGTAGGTTCCGCGTCTAAATACAGGGCTGCTAATGTCATGCAGGCAGGAGCTTTCACACTCATTACACTAGCTAATGCAAGCCGTCTAAAAGAGTGTGCTGTTAAAACTGACAAGCTCCAGGGATTTCACTGCCTGCTGAAATGTGTCAAAAGATGCTTCAGTGAGGTCAGAAGTAATAGTGTGAAAGTGGGTGTGTGAACGTGTGTCAGTGAGTGCTATCTTTTAACCGTTTGATGCGTAACCTAGGGGGTGTGTGGTTGTGCTGATGGGCAAGGGACTTCTATTCAAGAGCTTGAGATTGCATGCATATCTGACCTGGTCCAGTTTCTCAGTTTGAGACTTGAGTCTGCACACATTCACTTTCATCTCTGCATTCTCCTCTTCTAGCTGCTGGACCCTGTGGGGAGAAATCATCCATTATAAAGCAGATGCCGCACACTGCTTTTctgaaaatacacatttattatgcacatTTCATACACGCTTTTGTGAGTTTTCTAATTAGGTACCTGTTACTAAGCATTTCGATCTCCGTGCTCTTGTCTCTCTCCATCTTACTGTAGGCCTCTCTGTGTCTCTTCAGCTCCTCCTCTAAACATTGCTCTGCACGCGTCTCCTGATCTTTGATCTGCTCCTCCAGCTCATGTACC

Function

GO: NA

KEGG:

id description
ko04724 Glutamatergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU29717 True 2472 lncRNA 0.40 2 13940616 13943491

Neighbor

gene id symbol gene type direction distance location
trnat-cgu NA coding upstream 26922 13913623 ~ 13913694 (+)
crlf3 crlf3,LOC107688102,LOC107654479,LOC107721514,LOC107719981 coding upstream 38027 13888940 ~ 13902589 (+)
traf7 traf7,LOC107601260,LOC107719978,LOC107590399,LOC107654453,LOC107721517 coding upstream 132434 13796853 ~ 13808182 (+)
rpusd1 rpusd1,LOC107720093,LOC107654465,LOC107590456,LOC107688151 coding upstream 170671 13767191 ~ 13769945 (+)
LOC122339456 LOC107590441,LOC107721518,LOC107654452,LOC107719974,LOC107688138,LOC107601257 coding upstream 176244 13718936 ~ 13764372 (+)
scpep1 scpep1,LOC107654482,LOC107601266,LOC107590395,LOC107688106 coding downstream 38763 13982254 ~ 13986772 (+)
dus1l dus1l,LOC107601270,LOC107654489,LOC107688109,LOC107590391 coding downstream 86014 14029505 ~ 14036025 (+)
zgc:86896 zgc:86896,LOC107654493,LOC107601274,LOC107721506,LOC107719989,LOC107590453,LOC105899990 coding downstream 114153 14057644 ~ 14062454 (+)
wipi1 wipi1,LOC107721503,LOC107654490,LOC107688112,LOC107590389,LOC107719990 coding downstream 119782 14063273 ~ 14073404 (+)
slc16a6b slc16a6b,LOC107721502,LOC107719991,LOC107688113,LOC107654485,LOC107590388 coding downstream 132711 14076202 ~ 14084506 (+)
LOC122342149 NA non-coding upstream 20347 13913926 ~ 13920269 (+)
G19891 NA non-coding upstream 122394 13815353 ~ 13818222 (+)
G19890 NA non-coding upstream 148061 13787833 ~ 13792555 (+)
G19788 nsfa,LOC107689618,LOC107709994,LOC107601245 non-coding upstream 497038 13409739 ~ 13443578 (+)
G19798 NA non-coding upstream 498467 13441686 ~ 13442149 (+)
G20009 NA non-coding downstream 156682 14100173 ~ 14101904 (+)
G20057 NA non-coding downstream 204973 14148464 ~ 14150958 (+)
G20113 ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449 non-coding downstream 359659 14303150 ~ 14304893 (+)
G20146 NA non-coding downstream 436133 14379624 ~ 14457906 (+)
G20166 NA non-coding downstream 673771 14617262 ~ 14618834 (+)
rbbp6 rbbp6,LOC107689611,LOC107710004,LOC107590402,LOC107601255,LOC107688097,LOC107720072 other upstream 229751 13698537 ~ 13710865 (+)
si:dkey-204f11.64 LOC105898698 other upstream 825760 13112477 ~ 13114856 (+)
LOC122332158 LOC107583070,LOC107737766 other upstream 952703 12835381 ~ 12987913 (+)
gtpbp1 gtpbp1,LOC107554141,LOC107737742,LOC107582974 other upstream 1411813 12519837 ~ 12528803 (+)
G19326 NA other upstream 1426895 12511926 ~ 12513721 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other downstream 52470 13995961 ~ 14002378 (+)
G19973 NA other downstream 105999 14049490 ~ 14053032 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other downstream 174976 14118467 ~ 14119570 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other downstream 176694 14120185 ~ 14123128 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other downstream 311999 14255490 ~ 14273309 (+)

Expression


Co-expression Network