G20146



Basic Information


Item Value
gene id G20146
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14379624 ~ 14457906 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU29987
tttttttttttttttttttTTGTCATAGAAGAGAGCTGTACTTTATTAGACACACAACCACAGCAAGTATGTACAAAAGGTCTCAGCTCTCAACGATTTCtcacaggaaaaaataaaataaaataaaaataaagtcacatttCTCACAAAGTTATCATGGCATCCACACtgacaaattaatttctttttcttctgtatCTATAGGTGCTTATATATCTTATGTGTATATAGAGTGATTCTCAGTTGGTATATTACTCTATTCTAGAGATGGGAGGGTCACAGCGTGGGTAAAGGGCTCGCACCACTACTAGTGCGCTGATGGCCAGAGCTGAGTTTAATCTGCTCAGTTTCTCAGTAAAACACACTCAGAGCTCGCCACTCAAGTCTGGTTACCACATCACCACAGGTTACAGTAAGACTGGACATGCCTGAGCCACAAAGAAATCAGACatagaaaaagtcattttttcctACTCGGCTCTACAGCCGTGAGCCTCATATCATTGCACTTGACCTCGCTATTCTCTccgttgactttttttttaaaaaaaacatgtagataactttgttttttaaaatcatctgCACCGTGCGATTGCTTTTAGAATGTACATGCATTgctataattattgtttttaatatttttaaaacttttaatatatacCTTATAACTccatcttttaaataa
>TU29989
cttttttttttttttttttttttttttttTCATAGAAGAGAGCTGTACTTTATTAGACACACAACCACAGCAAGTATGTACAAAAGGTCTCAGCTCTCAACGATTTCtcacaggaaaaaataaaataaaataaaaataaagtcacatttCTCACAAAGTTATCATGGCATCCACACtgacaaattaatttctttttcttctgtatCTATAGGTGCTTATATATCTTATGTGTATATAGAGTGATTCTCAGTTGGTATATTACTCTATTCTAGAGATGGGAGGGTCACAGCGTGGGTAAAGGGCTCGCACCACTACTAGTGCGCTGATGGCCAGAGCTGAGTTTAATCTGCTCAGTTTCTCAGTAAAACACACTCAGAGCTCGCCACTCAAGTCTGGTTACCACATCACCACAGGTTACAGTAAGACTGGACATGCCTGAGCCACAAAGAAATCAGACatagaaaaagtcattttttcctACTCGGCTCTACAGCCGTGAGCCTCATATCATTGCACTTGACCTCGCTATTCTCTccgttgactttttttttaaaaaaaacatgtagataactttgttttttaaaatcatctgCACCGTGCGATTGCTTTTAGAATGTACATGCATTgctataattattgtttttaatatttttaaaacttttaatatatacCTTATAACTccatcttttaaataa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU29987 False 688 lncRNA 0.35 2 14433705 14457906
TU29989 True 695 lncRNA 0.35 2 14379624 14457906

Neighbor


gene id symbol gene type direction distance location
ezh1 ezh1,LOC107590376,LOC107720007,LOC107721487,LOC107688127,LOC107654511,LOC107601290 coding upstream 51894 14313028 ~ 14327730 (+)
nde1 nde1,LOC107654507,LOC107601288,LOC107688124 coding upstream 140509 14231891 ~ 14239115 (+)
gspt1l gspt1l,LOC107721494,LOC107590378,LOC107654506,LOC108438004,LOC108246886 coding upstream 150314 14222151 ~ 14229310 (+)
pdxdc1 LOC107719998,LOC107721496,LOC107654505 coding upstream 157814 14209727 ~ 14221810 (+)
si:dkeyp-72e1.9 si:dkeyp-72e1.9,LOC107721498,LOC107601283,LOC107688120,LOC107654504 coding upstream 184302 14157724 ~ 14195322 (+)
wnt9b wnt9b,LOC107721476,LOC107601233,LOC107720014,LOC107590369,LOC107674619,LOC107654519 coding downstream 126224 14584130 ~ 14592582 (+)
gosr2 gosr2,LOC107654523,LOC107721531,LOC107674598 coding downstream 145268 14603174 ~ 14608724 (+)
map3k14a LOC107654524,LOC107721479,LOC107601304,LOC107674595,LOC107590367 coding downstream 185059 14642965 ~ 14657476 (+)
rps11 rps11,LOC107674708,LOC107590366 coding downstream 211575 14669481 ~ 14671559 (+)
LOC122342191 NA coding downstream 212690 14670596 ~ 14670680 (+)
G20113 ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449 non-coding upstream 74731 14303150 ~ 14304893 (+)
G20057 NA non-coding upstream 228666 14148464 ~ 14150958 (+)
G20009 NA non-coding upstream 277720 14100173 ~ 14101904 (+)
G19963 NA non-coding upstream 436133 13940616 ~ 13943491 (+)
LOC122342149 NA non-coding upstream 459355 13913926 ~ 13920269 (+)
G20166 NA non-coding downstream 159356 14617262 ~ 14618834 (+)
G20168 NA non-coding downstream 168886 14626792 ~ 14629316 (+)
LOC122338121 NA non-coding downstream 206936 14664842 ~ 14667052 (+)
LOC122342199 NA non-coding downstream 207580 14665486 ~ 14665570 (+)
LOC122342189 NA non-coding downstream 207932 14665838 ~ 14665922 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 106315 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 256496 14120185 ~ 14123128 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other upstream 260054 14118467 ~ 14119570 (+)
G19973 NA other upstream 326592 14049490 ~ 14053032 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other upstream 377246 13995961 ~ 14002378 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other downstream 77273 14535179 ~ 14615408 (+)
G20167 NA other downstream 161088 14618994 ~ 14622858 (+)
G20172 rps11,LOC107674708 other downstream 207013 14664919 ~ 14671568 (+)
G20286 LOC107581737,LOC107654534 other downstream 691206 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 710432 15168338 ~ 15169258 (+)

Expression



Co-expression Network