G20148 (LOC107721478,LOC107654521,LOC107674594)


Basic Information

Item Value
gene id G20148
gene name LOC107721478,LOC107654521,LOC107674594
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 14535179 ~ 14615408 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU29992
ctaattttaaataaagaaaacattttcgaaaaacaaaacaaaacaaaaaaatctgaaaaataatttaaaatcaaatagaaaataaaattattgcaGAATACTACAATCATACAGTTGTTACAAGATGCAAAAACAGCAtctcaaaatgtacatttttcagtgCAAGATTTCACAATTTCAATAACAAGGAATGGGAACCTTCAAATCCCAAAGTGTAACCTGTTATGTAGTTTCAACAGCCTGTGACATTATAAAAGTTTTGAAATCAACATGTACAATGTCTGTTCCATTCACTATTTTTGgaaaatttatattgatttacaACCAACCCGCAAAAATAGCTTAACACAGTTGAGTGCTGAGTATGGCTTTTATTTGAATCATCTTGTTCATGTTGTTTTGTGACACCCTTTTGATTAGAGTATGGTACAACTGTTTCTGATAATTGATATGAGCTGAAAAggataaaatattacaacatttcAGCAAACCAATCATCAGTTTAACACACCCTGCTTTTGTATAGCAGGCTGAAgtgtatatttgcatattcatacaATGAGTTAATAAATTCTGCAACTTTCATGAATGCTTAGTACACAGAAAACAAGTCTCCAAAAATGACCCTCAATATCACCCAATATCAACTGTACCAAAGCACGCTAAAAGCCTACAACAAAGATCTTGATTATGGCTTCAGCCAATGAGCTTtagacaaataaacaaagatttATGACATACCATAGAAAACTAAATATGCCAGTGGTTTCCTAGTTATTATAAGATTCACATCTTGGATTATGAACCAATTCTTGCAACTCATACTCcttgtgtgaatatatatatatacacatgatgTTAAATACATCAACCTGCCAGCCTAGCTTCTGGTTCTGTCCATTACAATCTCAAATGCCAGCCAAGATCGTATTCTGTCCTCAATTCAAATGTACTCCTAAATAACCCTGTTGAGGTCCGTCTAATGTAGCAGAGCACGTAGAGGACAGTGTGTCGCCAGATCGTGTCAACCGGTAGCTAAATCTTTTTTAGCTATTCACTGCTGGGCCAGGCTGGGCCAGGCCCTCTCTTTGAGAGAAAACGGATTTTCAGGAGCCATGGTTTGGAGGGTGCTGAAGGTCCTGTCCTGAGAAGATAGGGTGAAGTAGTGGGTGTAGCTGAAGCGCAGCTGCTGCCGCAGCAGTAGCTGGCCGGGGGGCAAAGAGAGTTGGGTAGAGGGCAGCGTGTGGGACGTGGTGTAGAGCGAGAGGGGTGTGATGGAGCGCTGAAGCTGGTATAATATGTATAGGTTGGCCTGAAAGGAAGGCAGTGTGGTGGGCTGGAATCAAGCCGGTGTGTCCTAAAGAGTGACCCAGTGAGTGACCCAAAGAATGGCCCAATGGTGACAAGGAGATAGGGGTTAGATGATGTTGAGGTATGTGGTGCACCTGGGCCAGCTGGGCATGGGCAGGGTGAGGATGATGTGGGGTATGGGGATGGATGCCCATAGCAGCAGCATGGTGCTGCAGGATTGCGTGCTGGACTGTGGTAATCGAGGTAGCAGAAGCTGCAGAAACTGAGGGTTGTTGAATGTGGATAGGCTGCAGTGCAGCTGGTGGGGGTGGAGGCGCAGGGGCAAGATTGGCCGCTGCTGCCAAATTAGCTGCTGCCGCAGCAGCTGCAGCTGAAGGGAAGGTCTTCACCTGCTTGGCTAACAATTGCTGCTGAATGTGCTGTTGAGCTGCCTGTTGCAACTTGCTGTATTTCTCCATTTCCTCTGGGGTAAAggtgattggttgactttctaAAGGTGCAAGACCATCCTCTTCAGGTTCCATGCCCATTTCCCCATCCTCCATGTTGGGAGGGTAACCAGGGTAGGCGTGCATAGTAGGCTGCGGACCCATTTCTGGCCCCATTAAATGTCCATCCAGCATGGGATTGTTGGGGTCTTGTCTGGGTTCACCTTGGTATTGAGACATCATCAGTGCTGGATCCTGTTCATATTGTGGTTGAGAGTCATGAAGGGCTGGAGGGTCTGAGGGTGGATGTCTGGTCTCCTCGGACACCGCTGCACTTGATACAGCCTCCTCCAATTGCTgcttttgttgttgctgctgctgttgctgctgctgaaCTGGTGGTTGaggtggaggaggtggtggtggaAACTCACGGATGGGTTCTACCAGGATAACCTCATTACTATCTGAAATTTTCCCTTGCTCTGACTTTTCGCCATCGGTTGAACGTGTAAGAGGAAGTAACGATGGCTTCTTTCCTGCTTGGAGCTTGCCAAAAAGGGGCaacatgcttttatttccaAGGGCAGGGGGGAGCTTGGGCCCAAAATATCCCTGTGGAGGGTCCTTGATTTTGAGGCCTGTCTTGGTGCCAGTACCAGATTCATCCCCTCCTTTTTTAGACTGGATTTTCTCCAAGAGTTGTCGAGCTGTGAATGAATTTCGATGCTCTGCTGCCCCTCCTCCCTCCTTTGACGAAGCTCCACCACCACTTCTTGTTCCTTGCGCTGATGACGAGTTACTGTTTCGAGTTTGTGTGCGGGAAGAGGACCTTGGAGACTGGGAACGGTAGATTCGTGACCGATTGAAATCTCTCCGCCGGGTTGAGCTGTCAGATCGTCGACTGTGACCGTGCCGATGTGGAGATCCCTTTGTGGAGCTAGATGAGCGACTAGCGGAGCTACGACTGCGACTGTAGCTGCTGCGTCTGTAAGAACGAGCGCTGCTACTCCTACTACTACGACTGGAGCTGCGACTACTGCTTCGTTGGTGTCTCCGCCGATGATGCTTCCTGCGGCTGCGTGAGCGGGAGCGGGAACGGGAGTCCTCCTCTGAAGACGAAGGGTGTAACGTCGCCTGTGGGATCGCCCACTATCACGCCTTTCATAATCCGAGTCAGAGGAAGGTCTTCTAGATCTGCGGCGACGTCCTTCATCGCTGTAGTCACTGTAACTGTCTGAATAGCTATGGCTACGGCGACTGTAAGCACTGCTCCCTGCTGAGGACCGCTCAGAGCTACTCGAGTAGGATCGACTGCGAGACTTTTGACCTCTGTGGCGTCTATGGTTGTGATCTCCTCGGCGAGATGACCTACTGCGTGAACGTCCTGATCTCCCAGAATCATCACTGCGATGTCTTCGCTGCTCACGTGGTGGCGTAGAACGACGCCGAGGGGGTCGAGAACGTTGAGAGGATGATCCACCATCCTCCTCACTGTCACTACTTGGAGGTCGACCTCCACTTATGCTCTTCTGGGCAGAGGCAGAGCAGGAGGCGGCAGGTGTGTTAGTGTCAGGTTTAAGACGTTTAGTACCATTGTGTTCCTCCGTAGAGCTAGGCTTTCCTGCACTGCTTTCCTCAACTCCAGACCACTGAGAGATTTTGTGGGAACGTTTTCTCTTTCCTCCTTCATGGGACGTGCTTACTCCCGATGACTGAGCAGTGGCTACTCCATCTTTGTCAtccttgtctttctctttttccttgcTGTCACCTCCCTCGGCTTCAATTTCATCAGTGCTACgtggtttgtttttgcttttctttcttttgtgtttctttttctttttagttttctcTCCTGGAATCTCATTTTCTAACTCCCCCTCCATGGCTGCTTTTTCTTTACGTTTGGAACGCTTGCTTGACTTCttgtgtttcttcttcttcttctttttcttagACCCTGCAGAGACATCTTCATTACTTTGTAATTTCTGCTCATTGTTCTCACTCTCAGCACCCTCCTCTTTCAAGGACGATTGTTCTTTTTGAACTGTACTGGATCCTGCAATCGTTGTAGCAGCGCAAGCCTCTCCACTAGTGGCAGGAGTATTGTCTGTGTTTTCAGGCTTAGACCCCTCTTGTCCTTCAGCGCTAACTGGCTTGGCAGGTTTGCTGTTTTTGCTTGCCCAGTTTCCTTTGTTTCTTGACAGTTTGAAGTCAAAGTAAAGAGGATTACAACTGTAGGAGAGGGATGGCTGAGCCTTAGTAAACTCCAACAATTCAGAAGGCCACTGCAGTGTGGTGCTTTCATCCTTGCTTAGCACAGGAAAGAAGGGTCCAGTTGGCATGCGGGGACCTGTGTCTGTATGCTCGGACATTACTTGCTTGGTATCAGTTTGTTGGGATGAGCTATCCACCACTATTGTATCACTTTGCCCTGCAGGTGTGATTCCTGATTCTTCCTCTGCCTTCACTGTATCTGATGTGGGATTTGTATTTTGGGCCTGTGGTGGTTCATTCTCAGTGTCTTTTTCAGATGTGCAGATGCTGATTTTGATATGCTTTTGCTCTCCGTCGTTATCTGATACTGCTTTATCATCTTTTGTCccatcttcctcctcttccttgCCATCACACTGGTCTGAAGCCTTCATGAAAAGCAGAAACTGGAAATGCGGCTTGACCCGACAATGTGCAGGTGGTACATAATGGTAATACTGTGGTTCCTGTCCAGAGTAACCTTCCTCctttttcatcatcatcttcagtTTGTTCAAAGTAGAGGCCAGGGCACCTCCATCATCTGGCTGTGACTGGTCTTCCTCCCCCCCACCACatccaccaccaccaccacctcctccttctcctcctcctcctcctgctgctgctgctgctgctgcttgaGGGATATCCGTGGTGGAAGCCACACCTATGTCCTCTGCTCCAGTCTTTTCTCCTCCTTCTTCCTGACCTTCTTCTCCTTCCACCATCTCCTCACCATGGTCTGCAAACACAGCAGCAGCCGTCTCAAGCTTGACTGGTGCTTTCTTAGCAAAAGAGAAGGAGACACTCACTTTGGGAGCCTGTGAGCCTCCAGAAGGAGAAGAGCTAGCTTTGTTAAAGCCAAAGCTGATGGCAGGCCCTGTTCTAGGGGAGCCTTGACCACTAACACTACAGATTCCTTTATCTTCAATAGCTTCCGTGTTGGTTTCCACTGTCATAGGCACTCCATCCATAGAGTCCTCACCCTTTTCTCCATCCACTGCCACTGTGGTAGTTTTAAACATAGGGCCACTACCAGAGaca

Function

NR:

description
PREDICTED: G patch domain-containing protein 8-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29992 True 5051 TUCP 0.47 2 14535179 14615408

Neighbor

gene id symbol gene type direction distance location
fmnl1a LOC107721528,LOC107601298,LOC107654518,LOC107688135,LOC107720013 coding upstream 79936 14440829 ~ 14455243 (+)
LOC122341307 NA coding upstream 101587 14420262 ~ 14433592 (+)
LOC122341695 LOC107688129,LOC107720008,LOC107601293,LOC107654513 coding upstream 133285 14397150 ~ 14401894 (+)
LOC122341305 si:ch211-18i17.2,LOC107688129,LOC107720008,LOC107601293,LOC107721484,LOC107654513 coding upstream 138034 14369095 ~ 14397145 (+)
ezh1 ezh1,LOC107590376,LOC107720007,LOC107721487,LOC107688127,LOC107654511,LOC107601290 coding upstream 207449 14313028 ~ 14327730 (+)
map3k14a LOC107654524,LOC107721479,LOC107601304,LOC107674595,LOC107590367 coding downstream 27557 14642965 ~ 14657476 (+)
rps11 rps11,LOC107674708,LOC107590366 coding downstream 54073 14669481 ~ 14671559 (+)
LOC122342191 NA coding downstream 55188 14670596 ~ 14670680 (+)
hrob LOC107721529,LOC107654526,LOC107601306,LOC107720097 coding downstream 56909 14672317 ~ 14678865 (+)
asic2 asic2,LOC107654528,LOC107674665,LOC107720021,LOC108411330,LOC107592342 coding downstream 69238 14684646 ~ 14957726 (+)
G20146 NA non-coding upstream 77273 14379624 ~ 14457906 (+)
G20113 ramp2,LOC107721488,LOC107601292,LOC107654510,LOC107590449 non-coding upstream 230286 14303150 ~ 14304893 (+)
G20057 NA non-coding upstream 384221 14148464 ~ 14150958 (+)
G20009 NA non-coding upstream 433275 14100173 ~ 14101904 (+)
G19963 NA non-coding upstream 591688 13940616 ~ 13943491 (+)
G20166 NA non-coding downstream 1854 14617262 ~ 14618834 (+)
G20168 NA non-coding downstream 11384 14626792 ~ 14629316 (+)
LOC122338121 NA non-coding downstream 49434 14664842 ~ 14667052 (+)
LOC122342199 NA non-coding downstream 50078 14665486 ~ 14665570 (+)
LOC122342189 NA non-coding downstream 50430 14665838 ~ 14665922 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 261870 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 412051 14120185 ~ 14123128 (+)
G20015 cog1,LOC107721521,LOC107601277,LOC107654497,LOC107590385,LOC107688115,LOC107719994 other upstream 415609 14118467 ~ 14119570 (+)
G19973 NA other upstream 482147 14049490 ~ 14053032 (+)
slc16a3a si:ch211-234h8.7,slc16a3,LOC107720094,LOC107688105,LOC107590394 other upstream 532801 13995961 ~ 14002378 (+)
G20167 NA other downstream 3586 14618994 ~ 14622858 (+)
G20172 rps11,LOC107674708 other downstream 49511 14664919 ~ 14671568 (+)
G20286 LOC107581737,LOC107654534 other downstream 533704 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 552930 15168338 ~ 15169258 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other downstream 654392 15269800 ~ 15280113 (+)

Expression


Co-expression Network